Cargando…

Absence of optineurin (OPTN) gene mutations in Taiwanese patients with juvenile-onset open-angle glaucoma

PURPOSE: To investigate sequence variants in the optineurin (OPTN) gene in patients with juvenile–onset open-angle glaucoma (JOAG) in Taiwan. METHODS: We analyzed the sequence variants of OPTN in 51 unrelated Taiwanese probands with JOAG and in 51 control group subjects who did not have JOAG. Genomi...

Descripción completa

Detalles Bibliográficos
Autores principales: Yen, Yung-Chang, Yang, Jiann-Jou, Chou, Ming-Chih, Li, Shuan-Yow
Formato: Texto
Lenguaje:English
Publicado: Molecular Vision 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2268851/
https://www.ncbi.nlm.nih.gov/pubmed/18385781
_version_ 1782151699813629952
author Yen, Yung-Chang
Yang, Jiann-Jou
Chou, Ming-Chih
Li, Shuan-Yow
author_facet Yen, Yung-Chang
Yang, Jiann-Jou
Chou, Ming-Chih
Li, Shuan-Yow
author_sort Yen, Yung-Chang
collection PubMed
description PURPOSE: To investigate sequence variants in the optineurin (OPTN) gene in patients with juvenile–onset open-angle glaucoma (JOAG) in Taiwan. METHODS: We analyzed the sequence variants of OPTN in 51 unrelated Taiwanese probands with JOAG and in 51 control group subjects who did not have JOAG. Genomic DNA was extracted from the individuals and subjected to polymerase chain reaction (PCR) to amplify all 16 exons and flanking introns of OPTN. The amplified products were then screened for base variants by autosequence. Data from the two study groups were then compared using Fisher’s exact test and Armitage's trend test. RESULTS: Fifteen variants of OPTN were found in the 51 JOAG patients and 51 unrelated normal controls. Two were missense variants (M98K and K322E), one was a synonymous codon change (T34T), and 12 were changes in the noncoding sequences. Seven of the variants have been reported and eight were novel. All of the sequence changes were found in patients with JOAG and in the normal controls except for variant c.-233+25C>G, which was found only in the control group. Allelic frequencies of these sequence changes did not differ significantly between patients and controls (p>0.05) except for the variant c.-233+25C>G (p<0.001). Genotype frequencies of c.-233+25C>G was shown to be significant between the two groups using Fisher’s two-tailed exact test (p<0.001) and Armitage's trend test (p=6.815e(−06)). CONCLUSIONS: Our data indicate that none of the mutations in OPTN are associated with JOAG. The variant M98K is not a risk factor and the variant c.-233+25C>G may be protective against glaucoma in Taiwanese.
format Text
id pubmed-2268851
institution National Center for Biotechnology Information
language English
publishDate 2008
publisher Molecular Vision
record_format MEDLINE/PubMed
spelling pubmed-22688512008-03-20 Absence of optineurin (OPTN) gene mutations in Taiwanese patients with juvenile-onset open-angle glaucoma Yen, Yung-Chang Yang, Jiann-Jou Chou, Ming-Chih Li, Shuan-Yow Mol Vis Research Article PURPOSE: To investigate sequence variants in the optineurin (OPTN) gene in patients with juvenile–onset open-angle glaucoma (JOAG) in Taiwan. METHODS: We analyzed the sequence variants of OPTN in 51 unrelated Taiwanese probands with JOAG and in 51 control group subjects who did not have JOAG. Genomic DNA was extracted from the individuals and subjected to polymerase chain reaction (PCR) to amplify all 16 exons and flanking introns of OPTN. The amplified products were then screened for base variants by autosequence. Data from the two study groups were then compared using Fisher’s exact test and Armitage's trend test. RESULTS: Fifteen variants of OPTN were found in the 51 JOAG patients and 51 unrelated normal controls. Two were missense variants (M98K and K322E), one was a synonymous codon change (T34T), and 12 were changes in the noncoding sequences. Seven of the variants have been reported and eight were novel. All of the sequence changes were found in patients with JOAG and in the normal controls except for variant c.-233+25C>G, which was found only in the control group. Allelic frequencies of these sequence changes did not differ significantly between patients and controls (p>0.05) except for the variant c.-233+25C>G (p<0.001). Genotype frequencies of c.-233+25C>G was shown to be significant between the two groups using Fisher’s two-tailed exact test (p<0.001) and Armitage's trend test (p=6.815e(−06)). CONCLUSIONS: Our data indicate that none of the mutations in OPTN are associated with JOAG. The variant M98K is not a risk factor and the variant c.-233+25C>G may be protective against glaucoma in Taiwanese. Molecular Vision 2008-03-11 /pmc/articles/PMC2268851/ /pubmed/18385781 Text en http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Yen, Yung-Chang
Yang, Jiann-Jou
Chou, Ming-Chih
Li, Shuan-Yow
Absence of optineurin (OPTN) gene mutations in Taiwanese patients with juvenile-onset open-angle glaucoma
title Absence of optineurin (OPTN) gene mutations in Taiwanese patients with juvenile-onset open-angle glaucoma
title_full Absence of optineurin (OPTN) gene mutations in Taiwanese patients with juvenile-onset open-angle glaucoma
title_fullStr Absence of optineurin (OPTN) gene mutations in Taiwanese patients with juvenile-onset open-angle glaucoma
title_full_unstemmed Absence of optineurin (OPTN) gene mutations in Taiwanese patients with juvenile-onset open-angle glaucoma
title_short Absence of optineurin (OPTN) gene mutations in Taiwanese patients with juvenile-onset open-angle glaucoma
title_sort absence of optineurin (optn) gene mutations in taiwanese patients with juvenile-onset open-angle glaucoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2268851/
https://www.ncbi.nlm.nih.gov/pubmed/18385781
work_keys_str_mv AT yenyungchang absenceofoptineurinoptngenemutationsintaiwanesepatientswithjuvenileonsetopenangleglaucoma
AT yangjiannjou absenceofoptineurinoptngenemutationsintaiwanesepatientswithjuvenileonsetopenangleglaucoma
AT choumingchih absenceofoptineurinoptngenemutationsintaiwanesepatientswithjuvenileonsetopenangleglaucoma
AT lishuanyow absenceofoptineurinoptngenemutationsintaiwanesepatientswithjuvenileonsetopenangleglaucoma