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High-throughput analysis of spatio-temporal dynamics in Dictyostelium

We demonstrate a time-lapse video approach that allows rapid examination of the spatio-temporal dynamics of Dictyostelium cell populations. Quantitative information was gathered by sampling life histories of more than 2,000 mutant clones from a large mutagenesis collection. Approximately 4% of the c...

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Detalles Bibliográficos
Autores principales: Sawai, Satoshi, Guan, Xiao-Juan, Kuspa, Adam, Cox, Edward C
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2007
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2323234/
https://www.ncbi.nlm.nih.gov/pubmed/17659086
http://dx.doi.org/10.1186/gb-2007-8-7-r144
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author Sawai, Satoshi
Guan, Xiao-Juan
Kuspa, Adam
Cox, Edward C
author_facet Sawai, Satoshi
Guan, Xiao-Juan
Kuspa, Adam
Cox, Edward C
author_sort Sawai, Satoshi
collection PubMed
description We demonstrate a time-lapse video approach that allows rapid examination of the spatio-temporal dynamics of Dictyostelium cell populations. Quantitative information was gathered by sampling life histories of more than 2,000 mutant clones from a large mutagenesis collection. Approximately 4% of the clonal lines showed a mutant phenotype at one stage. Many of these could be ordered by clustering into functional groups. The dataset allows one to search and retrieve movies on a gene-by-gene and phenotype-by-phenotype basis.
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spelling pubmed-23232342008-04-21 High-throughput analysis of spatio-temporal dynamics in Dictyostelium Sawai, Satoshi Guan, Xiao-Juan Kuspa, Adam Cox, Edward C Genome Biol Method We demonstrate a time-lapse video approach that allows rapid examination of the spatio-temporal dynamics of Dictyostelium cell populations. Quantitative information was gathered by sampling life histories of more than 2,000 mutant clones from a large mutagenesis collection. Approximately 4% of the clonal lines showed a mutant phenotype at one stage. Many of these could be ordered by clustering into functional groups. The dataset allows one to search and retrieve movies on a gene-by-gene and phenotype-by-phenotype basis. BioMed Central 2007 2007-07-21 /pmc/articles/PMC2323234/ /pubmed/17659086 http://dx.doi.org/10.1186/gb-2007-8-7-r144 Text en Copyright © 2007 Sawai et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Method
Sawai, Satoshi
Guan, Xiao-Juan
Kuspa, Adam
Cox, Edward C
High-throughput analysis of spatio-temporal dynamics in Dictyostelium
title High-throughput analysis of spatio-temporal dynamics in Dictyostelium
title_full High-throughput analysis of spatio-temporal dynamics in Dictyostelium
title_fullStr High-throughput analysis of spatio-temporal dynamics in Dictyostelium
title_full_unstemmed High-throughput analysis of spatio-temporal dynamics in Dictyostelium
title_short High-throughput analysis of spatio-temporal dynamics in Dictyostelium
title_sort high-throughput analysis of spatio-temporal dynamics in dictyostelium
topic Method
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2323234/
https://www.ncbi.nlm.nih.gov/pubmed/17659086
http://dx.doi.org/10.1186/gb-2007-8-7-r144
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