Cargando…

A novel semi-automatic image processing approach to determine Plasmodium falciparum parasitemia in Giemsa-stained thin blood smears

BACKGROUND: Malaria parasitemia is commonly used as a measurement of the amount of parasites in the patient's blood and a crucial indicator for the degree of infection. Manual evaluation of Giemsa-stained thin blood smears under the microscope is onerous, time consuming and subject to human err...

Descripción completa

Detalles Bibliográficos
Autores principales: Le, Minh-Tam, Bretschneider, Timo R, Kuss, Claudia, Preiser, Peter R
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2330144/
https://www.ncbi.nlm.nih.gov/pubmed/18373862
http://dx.doi.org/10.1186/1471-2121-9-15
_version_ 1782152792265195520
author Le, Minh-Tam
Bretschneider, Timo R
Kuss, Claudia
Preiser, Peter R
author_facet Le, Minh-Tam
Bretschneider, Timo R
Kuss, Claudia
Preiser, Peter R
author_sort Le, Minh-Tam
collection PubMed
description BACKGROUND: Malaria parasitemia is commonly used as a measurement of the amount of parasites in the patient's blood and a crucial indicator for the degree of infection. Manual evaluation of Giemsa-stained thin blood smears under the microscope is onerous, time consuming and subject to human error. Although automatic assessments can overcome some of these problems the available methods are currently limited by their inability to evaluate cases that deviate from a chosen "standard" model. RESULTS: In this study reliable parasitemia counts were achieved even for sub-standard smear and image quality. The outcome was assessed through comparisons with manual evaluations of more than 200 sample smears and related to the complexity of cell overlaps. On average an estimation error of less than 1% with respect to the average of manually obtained parasitemia counts was achieved. In particular the results from the proposed approach are generally within one standard deviation of the counts provided by a comparison group of malariologists yielding a correlation of 0.97. Variations occur mainly for blurred out-of-focus imagery exhibiting larger degrees of cell overlaps in clusters of erythrocytes. The assessment was also carried out in terms of precision and recall and combined in the F-measure providing results generally in the range of 92% to 97% for a variety of smears. In this context the observed trade-off relation between precision and recall guaranteed stable results. Finally, relating the F-measure with the degree of cell overlaps, showed that up to 50% total cell overlap can be tolerated if the smear image is well-focused and the smear itself adequately stained. CONCLUSION: The automatic analysis has proven to be comparable with manual evaluations in terms of accuracy. Moreover, the test results have shown that the proposed comparison-based approach, by exploiting the interrelation between different images and color channels, has successfully overcome most of the inherent limitations possibly occurring during the sample preparation and image acquisition phase. Eventually, this can be seen as an opportunity for developing low-cost solutions for mass screening.
format Text
id pubmed-2330144
institution National Center for Biotechnology Information
language English
publishDate 2008
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-23301442008-04-25 A novel semi-automatic image processing approach to determine Plasmodium falciparum parasitemia in Giemsa-stained thin blood smears Le, Minh-Tam Bretschneider, Timo R Kuss, Claudia Preiser, Peter R BMC Cell Biol Research Article BACKGROUND: Malaria parasitemia is commonly used as a measurement of the amount of parasites in the patient's blood and a crucial indicator for the degree of infection. Manual evaluation of Giemsa-stained thin blood smears under the microscope is onerous, time consuming and subject to human error. Although automatic assessments can overcome some of these problems the available methods are currently limited by their inability to evaluate cases that deviate from a chosen "standard" model. RESULTS: In this study reliable parasitemia counts were achieved even for sub-standard smear and image quality. The outcome was assessed through comparisons with manual evaluations of more than 200 sample smears and related to the complexity of cell overlaps. On average an estimation error of less than 1% with respect to the average of manually obtained parasitemia counts was achieved. In particular the results from the proposed approach are generally within one standard deviation of the counts provided by a comparison group of malariologists yielding a correlation of 0.97. Variations occur mainly for blurred out-of-focus imagery exhibiting larger degrees of cell overlaps in clusters of erythrocytes. The assessment was also carried out in terms of precision and recall and combined in the F-measure providing results generally in the range of 92% to 97% for a variety of smears. In this context the observed trade-off relation between precision and recall guaranteed stable results. Finally, relating the F-measure with the degree of cell overlaps, showed that up to 50% total cell overlap can be tolerated if the smear image is well-focused and the smear itself adequately stained. CONCLUSION: The automatic analysis has proven to be comparable with manual evaluations in terms of accuracy. Moreover, the test results have shown that the proposed comparison-based approach, by exploiting the interrelation between different images and color channels, has successfully overcome most of the inherent limitations possibly occurring during the sample preparation and image acquisition phase. Eventually, this can be seen as an opportunity for developing low-cost solutions for mass screening. BioMed Central 2008-03-28 /pmc/articles/PMC2330144/ /pubmed/18373862 http://dx.doi.org/10.1186/1471-2121-9-15 Text en Copyright © 2008 Le et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Le, Minh-Tam
Bretschneider, Timo R
Kuss, Claudia
Preiser, Peter R
A novel semi-automatic image processing approach to determine Plasmodium falciparum parasitemia in Giemsa-stained thin blood smears
title A novel semi-automatic image processing approach to determine Plasmodium falciparum parasitemia in Giemsa-stained thin blood smears
title_full A novel semi-automatic image processing approach to determine Plasmodium falciparum parasitemia in Giemsa-stained thin blood smears
title_fullStr A novel semi-automatic image processing approach to determine Plasmodium falciparum parasitemia in Giemsa-stained thin blood smears
title_full_unstemmed A novel semi-automatic image processing approach to determine Plasmodium falciparum parasitemia in Giemsa-stained thin blood smears
title_short A novel semi-automatic image processing approach to determine Plasmodium falciparum parasitemia in Giemsa-stained thin blood smears
title_sort novel semi-automatic image processing approach to determine plasmodium falciparum parasitemia in giemsa-stained thin blood smears
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2330144/
https://www.ncbi.nlm.nih.gov/pubmed/18373862
http://dx.doi.org/10.1186/1471-2121-9-15
work_keys_str_mv AT leminhtam anovelsemiautomaticimageprocessingapproachtodetermineplasmodiumfalciparumparasitemiaingiemsastainedthinbloodsmears
AT bretschneidertimor anovelsemiautomaticimageprocessingapproachtodetermineplasmodiumfalciparumparasitemiaingiemsastainedthinbloodsmears
AT kussclaudia anovelsemiautomaticimageprocessingapproachtodetermineplasmodiumfalciparumparasitemiaingiemsastainedthinbloodsmears
AT preiserpeterr anovelsemiautomaticimageprocessingapproachtodetermineplasmodiumfalciparumparasitemiaingiemsastainedthinbloodsmears
AT leminhtam novelsemiautomaticimageprocessingapproachtodetermineplasmodiumfalciparumparasitemiaingiemsastainedthinbloodsmears
AT bretschneidertimor novelsemiautomaticimageprocessingapproachtodetermineplasmodiumfalciparumparasitemiaingiemsastainedthinbloodsmears
AT kussclaudia novelsemiautomaticimageprocessingapproachtodetermineplasmodiumfalciparumparasitemiaingiemsastainedthinbloodsmears
AT preiserpeterr novelsemiautomaticimageprocessingapproachtodetermineplasmodiumfalciparumparasitemiaingiemsastainedthinbloodsmears