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Execution of the SimSET Monte Carlo PET/SPECT Simulator in the Condor Distributed Computing Environment
SimSET is a package for simulation of emission tomography data sets. Condor is a popular distributed computing environment. Simple C/C++ applications and shell scripts are presented which allow the execution of SimSET on the Condor environment. This is accomplished without any modification to SimSET...
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Formato: | Texto |
Lenguaje: | English |
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Springer-Verlag
2007
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2335286/ https://www.ncbi.nlm.nih.gov/pubmed/17690935 http://dx.doi.org/10.1007/s10278-007-9058-z |
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author | Baum, Karl G. Helguera, María |
author_facet | Baum, Karl G. Helguera, María |
author_sort | Baum, Karl G. |
collection | PubMed |
description | SimSET is a package for simulation of emission tomography data sets. Condor is a popular distributed computing environment. Simple C/C++ applications and shell scripts are presented which allow the execution of SimSET on the Condor environment. This is accomplished without any modification to SimSET by executing multiple instances and using its combinebin utility. This enables research facilities without dedicated parallel computing systems to utilize the idle cycles of desktop workstations to greatly reduce the run times of their SimSET simulations. The necessary steps to implement this approach in other environments are presented along with sample results. |
format | Text |
id | pubmed-2335286 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2007 |
publisher | Springer-Verlag |
record_format | MEDLINE/PubMed |
spelling | pubmed-23352862008-04-28 Execution of the SimSET Monte Carlo PET/SPECT Simulator in the Condor Distributed Computing Environment Baum, Karl G. Helguera, María J Digit Imaging Article SimSET is a package for simulation of emission tomography data sets. Condor is a popular distributed computing environment. Simple C/C++ applications and shell scripts are presented which allow the execution of SimSET on the Condor environment. This is accomplished without any modification to SimSET by executing multiple instances and using its combinebin utility. This enables research facilities without dedicated parallel computing systems to utilize the idle cycles of desktop workstations to greatly reduce the run times of their SimSET simulations. The necessary steps to implement this approach in other environments are presented along with sample results. Springer-Verlag 2007-08-10 2007-11 /pmc/articles/PMC2335286/ /pubmed/17690935 http://dx.doi.org/10.1007/s10278-007-9058-z Text en © Society for Imaging Informatics in Medicine 2007 |
spellingShingle | Article Baum, Karl G. Helguera, María Execution of the SimSET Monte Carlo PET/SPECT Simulator in the Condor Distributed Computing Environment |
title | Execution of the SimSET Monte Carlo PET/SPECT Simulator in the Condor Distributed Computing Environment |
title_full | Execution of the SimSET Monte Carlo PET/SPECT Simulator in the Condor Distributed Computing Environment |
title_fullStr | Execution of the SimSET Monte Carlo PET/SPECT Simulator in the Condor Distributed Computing Environment |
title_full_unstemmed | Execution of the SimSET Monte Carlo PET/SPECT Simulator in the Condor Distributed Computing Environment |
title_short | Execution of the SimSET Monte Carlo PET/SPECT Simulator in the Condor Distributed Computing Environment |
title_sort | execution of the simset monte carlo pet/spect simulator in the condor distributed computing environment |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2335286/ https://www.ncbi.nlm.nih.gov/pubmed/17690935 http://dx.doi.org/10.1007/s10278-007-9058-z |
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