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Microarray-based gene expression profiles in multiple tissues of the domesticated silkworm, Bombyx mori

We designed and constructed a genome-wide microarray with 22,987 70-mer oligonucleotides covering the presently known and predicted genes in the silkworm genome, and surveyed the gene expression in multiple silkworm tissues on day 3 of the fifth instar. Clusters of tissue-prevalent and tissue-specif...

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Autores principales: Xia, Qingyou, Cheng, Daojun, Duan, Jun, Wang, Genhong, Cheng, Tingcai, Zha, Xingfu, Liu, Chun, Zhao, Ping, Dai, Fangyin, Zhang, Ze, He, Ningjia, Zhang, Liang, Xiang, Zhonghuai
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2007
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2374993/
https://www.ncbi.nlm.nih.gov/pubmed/17683582
http://dx.doi.org/10.1186/gb-2007-8-8-r162
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author Xia, Qingyou
Cheng, Daojun
Duan, Jun
Wang, Genhong
Cheng, Tingcai
Zha, Xingfu
Liu, Chun
Zhao, Ping
Dai, Fangyin
Zhang, Ze
He, Ningjia
Zhang, Liang
Xiang, Zhonghuai
author_facet Xia, Qingyou
Cheng, Daojun
Duan, Jun
Wang, Genhong
Cheng, Tingcai
Zha, Xingfu
Liu, Chun
Zhao, Ping
Dai, Fangyin
Zhang, Ze
He, Ningjia
Zhang, Liang
Xiang, Zhonghuai
author_sort Xia, Qingyou
collection PubMed
description We designed and constructed a genome-wide microarray with 22,987 70-mer oligonucleotides covering the presently known and predicted genes in the silkworm genome, and surveyed the gene expression in multiple silkworm tissues on day 3 of the fifth instar. Clusters of tissue-prevalent and tissue-specific genes and genes that are differentially expressed in different tissues were identified, and they reflect well major tissue-specific functions on the molecular level. The data presented in this study provide a new resource for annotating the silkworm genome.
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spelling pubmed-23749932008-05-10 Microarray-based gene expression profiles in multiple tissues of the domesticated silkworm, Bombyx mori Xia, Qingyou Cheng, Daojun Duan, Jun Wang, Genhong Cheng, Tingcai Zha, Xingfu Liu, Chun Zhao, Ping Dai, Fangyin Zhang, Ze He, Ningjia Zhang, Liang Xiang, Zhonghuai Genome Biol Method We designed and constructed a genome-wide microarray with 22,987 70-mer oligonucleotides covering the presently known and predicted genes in the silkworm genome, and surveyed the gene expression in multiple silkworm tissues on day 3 of the fifth instar. Clusters of tissue-prevalent and tissue-specific genes and genes that are differentially expressed in different tissues were identified, and they reflect well major tissue-specific functions on the molecular level. The data presented in this study provide a new resource for annotating the silkworm genome. BioMed Central 2007 2007-08-04 /pmc/articles/PMC2374993/ /pubmed/17683582 http://dx.doi.org/10.1186/gb-2007-8-8-r162 Text en Copyright © 2007 Xia et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Method
Xia, Qingyou
Cheng, Daojun
Duan, Jun
Wang, Genhong
Cheng, Tingcai
Zha, Xingfu
Liu, Chun
Zhao, Ping
Dai, Fangyin
Zhang, Ze
He, Ningjia
Zhang, Liang
Xiang, Zhonghuai
Microarray-based gene expression profiles in multiple tissues of the domesticated silkworm, Bombyx mori
title Microarray-based gene expression profiles in multiple tissues of the domesticated silkworm, Bombyx mori
title_full Microarray-based gene expression profiles in multiple tissues of the domesticated silkworm, Bombyx mori
title_fullStr Microarray-based gene expression profiles in multiple tissues of the domesticated silkworm, Bombyx mori
title_full_unstemmed Microarray-based gene expression profiles in multiple tissues of the domesticated silkworm, Bombyx mori
title_short Microarray-based gene expression profiles in multiple tissues of the domesticated silkworm, Bombyx mori
title_sort microarray-based gene expression profiles in multiple tissues of the domesticated silkworm, bombyx mori
topic Method
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2374993/
https://www.ncbi.nlm.nih.gov/pubmed/17683582
http://dx.doi.org/10.1186/gb-2007-8-8-r162
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