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Universal seeds for cDNA-to-genome comparison

BACKGROUND: To meet the needs of gene annotation for newly sequenced organisms, optimized spaced seeds can be implemented into cross-species sequence alignment programs to accurately align gene sequences to the genome of a related species. So far, seed performance has been tested for comparisons bet...

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Detalles Bibliográficos
Autores principales: Zhou, Leming, Stanton, Jonathan, Florea, Liliana
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2375135/
https://www.ncbi.nlm.nih.gov/pubmed/18215286
http://dx.doi.org/10.1186/1471-2105-9-36