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Application of Association Mapping to Understanding the Genetic Diversity of Plant Germplasm Resources

Compared to the conventional linkage mapping, linkage disequilibrium (LD)-mapping, using the nonrandom associations of loci in haplotypes, is a powerful high-resolution mapping tool for complex quantitative traits. The recent advances in the development of unbiased association mapping approaches for...

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Detalles Bibliográficos
Autores principales: Abdurakhmonov, Ibrokhim Y., Abdukarimov, Abdusattor
Formato: Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2423417/
https://www.ncbi.nlm.nih.gov/pubmed/18551188
http://dx.doi.org/10.1155/2008/574927
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author Abdurakhmonov, Ibrokhim Y.
Abdukarimov, Abdusattor
author_facet Abdurakhmonov, Ibrokhim Y.
Abdukarimov, Abdusattor
author_sort Abdurakhmonov, Ibrokhim Y.
collection PubMed
description Compared to the conventional linkage mapping, linkage disequilibrium (LD)-mapping, using the nonrandom associations of loci in haplotypes, is a powerful high-resolution mapping tool for complex quantitative traits. The recent advances in the development of unbiased association mapping approaches for plant population with their successful applications in dissecting a number of simple to complex traits in many crop species demonstrate a flourish of the approach as a “powerful gene tagging” tool for crops in the plant genomics era of 21st century. The goal of this review is to provide nonexpert readers of crop breeding community with (1) the basic concept, merits, and simple description of existing methodologies for an association mapping with the recent improvements for plant populations, and (2) the details of some of pioneer and recent studies on association mapping in various crop species to demonstrate the feasibility, success, problems, and future perspectives of the efforts in plants. This should be helpful for interested readers of international plant research community as a guideline for the basic understanding, choosing the appropriate methods, and its application.
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spelling pubmed-24234172008-06-12 Application of Association Mapping to Understanding the Genetic Diversity of Plant Germplasm Resources Abdurakhmonov, Ibrokhim Y. Abdukarimov, Abdusattor Int J Plant Genomics Review Article Compared to the conventional linkage mapping, linkage disequilibrium (LD)-mapping, using the nonrandom associations of loci in haplotypes, is a powerful high-resolution mapping tool for complex quantitative traits. The recent advances in the development of unbiased association mapping approaches for plant population with their successful applications in dissecting a number of simple to complex traits in many crop species demonstrate a flourish of the approach as a “powerful gene tagging” tool for crops in the plant genomics era of 21st century. The goal of this review is to provide nonexpert readers of crop breeding community with (1) the basic concept, merits, and simple description of existing methodologies for an association mapping with the recent improvements for plant populations, and (2) the details of some of pioneer and recent studies on association mapping in various crop species to demonstrate the feasibility, success, problems, and future perspectives of the efforts in plants. This should be helpful for interested readers of international plant research community as a guideline for the basic understanding, choosing the appropriate methods, and its application. Hindawi Publishing Corporation 2008 2008-06-08 /pmc/articles/PMC2423417/ /pubmed/18551188 http://dx.doi.org/10.1155/2008/574927 Text en Copyright © 2008 I. Y. Abdurakhmonov and A. Abdukarimov. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review Article
Abdurakhmonov, Ibrokhim Y.
Abdukarimov, Abdusattor
Application of Association Mapping to Understanding the Genetic Diversity of Plant Germplasm Resources
title Application of Association Mapping to Understanding the Genetic Diversity of Plant Germplasm Resources
title_full Application of Association Mapping to Understanding the Genetic Diversity of Plant Germplasm Resources
title_fullStr Application of Association Mapping to Understanding the Genetic Diversity of Plant Germplasm Resources
title_full_unstemmed Application of Association Mapping to Understanding the Genetic Diversity of Plant Germplasm Resources
title_short Application of Association Mapping to Understanding the Genetic Diversity of Plant Germplasm Resources
title_sort application of association mapping to understanding the genetic diversity of plant germplasm resources
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2423417/
https://www.ncbi.nlm.nih.gov/pubmed/18551188
http://dx.doi.org/10.1155/2008/574927
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