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Internet Image Viewer (iiV)

BACKGROUND: Visualizing 3-dimensional (3-D) datasets is an important part of modern neuroimaging research. Many tools address this problem; however, they often fail to address specific needs and flexibility, such as the ability to work with different data formats, to control how and what data are di...

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Detalles Bibliográficos
Autores principales: Lee, Joel T, Munch, Kristin R, Carlis, John V, Pardo, José V
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2430954/
https://www.ncbi.nlm.nih.gov/pubmed/18510765
http://dx.doi.org/10.1186/1471-2342-8-10
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author Lee, Joel T
Munch, Kristin R
Carlis, John V
Pardo, José V
author_facet Lee, Joel T
Munch, Kristin R
Carlis, John V
Pardo, José V
author_sort Lee, Joel T
collection PubMed
description BACKGROUND: Visualizing 3-dimensional (3-D) datasets is an important part of modern neuroimaging research. Many tools address this problem; however, they often fail to address specific needs and flexibility, such as the ability to work with different data formats, to control how and what data are displayed, to interact with values, and to undo mistakes. RESULTS: iiV, an interactive software program for displaying 3-D brain images, is described. This tool was programmed to solve basic problems in 3-D data visualization. It is written in Java so it is extensible, is platform independent, and can display images within web pages. iiV displays 3-D images as 2-dimensional (2-D) slices with each slice being an independent object with independent features such as location, zoom, colors, labels, etc. Feature manipulation becomes easier by having a full set of editing capabilities including the following: undo or redo changes; drag, copy, delete and paste objects; and save objects with their features to a file for future editing. It can read multiple standard positron emission tomography (PET) and magnetic resonance imaging (MRI) file formats like ECAT, ECAT7, ANALYZE, NIfTI-1 and DICOM. We present sample applications to illustrate some of the features and capabilities. CONCLUSION: iiV is an image display tool with many useful features. It is highly extensible, platform independent, and web-compatible. This report summarizes its features and applications, while illustrating iiV's usefulness to the biomedical imaging community.
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spelling pubmed-24309542008-06-19 Internet Image Viewer (iiV) Lee, Joel T Munch, Kristin R Carlis, John V Pardo, José V BMC Med Imaging Software BACKGROUND: Visualizing 3-dimensional (3-D) datasets is an important part of modern neuroimaging research. Many tools address this problem; however, they often fail to address specific needs and flexibility, such as the ability to work with different data formats, to control how and what data are displayed, to interact with values, and to undo mistakes. RESULTS: iiV, an interactive software program for displaying 3-D brain images, is described. This tool was programmed to solve basic problems in 3-D data visualization. It is written in Java so it is extensible, is platform independent, and can display images within web pages. iiV displays 3-D images as 2-dimensional (2-D) slices with each slice being an independent object with independent features such as location, zoom, colors, labels, etc. Feature manipulation becomes easier by having a full set of editing capabilities including the following: undo or redo changes; drag, copy, delete and paste objects; and save objects with their features to a file for future editing. It can read multiple standard positron emission tomography (PET) and magnetic resonance imaging (MRI) file formats like ECAT, ECAT7, ANALYZE, NIfTI-1 and DICOM. We present sample applications to illustrate some of the features and capabilities. CONCLUSION: iiV is an image display tool with many useful features. It is highly extensible, platform independent, and web-compatible. This report summarizes its features and applications, while illustrating iiV's usefulness to the biomedical imaging community. BioMed Central 2008-05-29 /pmc/articles/PMC2430954/ /pubmed/18510765 http://dx.doi.org/10.1186/1471-2342-8-10 Text en Copyright © 2008 Lee et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Software
Lee, Joel T
Munch, Kristin R
Carlis, John V
Pardo, José V
Internet Image Viewer (iiV)
title Internet Image Viewer (iiV)
title_full Internet Image Viewer (iiV)
title_fullStr Internet Image Viewer (iiV)
title_full_unstemmed Internet Image Viewer (iiV)
title_short Internet Image Viewer (iiV)
title_sort internet image viewer (iiv)
topic Software
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2430954/
https://www.ncbi.nlm.nih.gov/pubmed/18510765
http://dx.doi.org/10.1186/1471-2342-8-10
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