Cargando…

Probing the Dynamics of Identified Neurons with a Data-Driven Modeling Approach

In controlling animal behavior the nervous system has to perform within the operational limits set by the requirements of each specific behavior. The implications for the corresponding range of suitable network, single neuron, and ion channel properties have remained elusive. In this article we appr...

Descripción completa

Detalles Bibliográficos
Autores principales: Nowotny, Thomas, Levi, Rafael, Selverston, Allen I.
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2440808/
https://www.ncbi.nlm.nih.gov/pubmed/18612435
http://dx.doi.org/10.1371/journal.pone.0002627
_version_ 1782156581521063936
author Nowotny, Thomas
Levi, Rafael
Selverston, Allen I.
author_facet Nowotny, Thomas
Levi, Rafael
Selverston, Allen I.
author_sort Nowotny, Thomas
collection PubMed
description In controlling animal behavior the nervous system has to perform within the operational limits set by the requirements of each specific behavior. The implications for the corresponding range of suitable network, single neuron, and ion channel properties have remained elusive. In this article we approach the question of how well-constrained properties of neuronal systems may be on the neuronal level. We used large data sets of the activity of isolated invertebrate identified cells and built an accurate conductance-based model for this cell type using customized automated parameter estimation techniques. By direct inspection of the data we found that the variability of the neurons is larger when they are isolated from the circuit than when in the intact system. Furthermore, the responses of the neurons to perturbations appear to be more consistent than their autonomous behavior under stationary conditions. In the developed model, the constraints on different parameters that enforce appropriate model dynamics vary widely from some very tightly controlled parameters to others that are almost arbitrary. The model also allows predictions for the effect of blocking selected ionic currents and to prove that the origin of irregular dynamics in the neuron model is proper chaoticity and that this chaoticity is typical in an appropriate sense. Our results indicate that data driven models are useful tools for the in-depth analysis of neuronal dynamics. The better consistency of responses to perturbations, in the real neurons as well as in the model, suggests a paradigm shift away from measuring autonomous dynamics alone towards protocols of controlled perturbations. Our predictions for the impact of channel blockers on the neuronal dynamics and the proof of chaoticity underscore the wide scope of our approach.
format Text
id pubmed-2440808
institution National Center for Biotechnology Information
language English
publishDate 2008
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-24408082008-07-09 Probing the Dynamics of Identified Neurons with a Data-Driven Modeling Approach Nowotny, Thomas Levi, Rafael Selverston, Allen I. PLoS One Research Article In controlling animal behavior the nervous system has to perform within the operational limits set by the requirements of each specific behavior. The implications for the corresponding range of suitable network, single neuron, and ion channel properties have remained elusive. In this article we approach the question of how well-constrained properties of neuronal systems may be on the neuronal level. We used large data sets of the activity of isolated invertebrate identified cells and built an accurate conductance-based model for this cell type using customized automated parameter estimation techniques. By direct inspection of the data we found that the variability of the neurons is larger when they are isolated from the circuit than when in the intact system. Furthermore, the responses of the neurons to perturbations appear to be more consistent than their autonomous behavior under stationary conditions. In the developed model, the constraints on different parameters that enforce appropriate model dynamics vary widely from some very tightly controlled parameters to others that are almost arbitrary. The model also allows predictions for the effect of blocking selected ionic currents and to prove that the origin of irregular dynamics in the neuron model is proper chaoticity and that this chaoticity is typical in an appropriate sense. Our results indicate that data driven models are useful tools for the in-depth analysis of neuronal dynamics. The better consistency of responses to perturbations, in the real neurons as well as in the model, suggests a paradigm shift away from measuring autonomous dynamics alone towards protocols of controlled perturbations. Our predictions for the impact of channel blockers on the neuronal dynamics and the proof of chaoticity underscore the wide scope of our approach. Public Library of Science 2008-07-09 /pmc/articles/PMC2440808/ /pubmed/18612435 http://dx.doi.org/10.1371/journal.pone.0002627 Text en Nowotny et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Nowotny, Thomas
Levi, Rafael
Selverston, Allen I.
Probing the Dynamics of Identified Neurons with a Data-Driven Modeling Approach
title Probing the Dynamics of Identified Neurons with a Data-Driven Modeling Approach
title_full Probing the Dynamics of Identified Neurons with a Data-Driven Modeling Approach
title_fullStr Probing the Dynamics of Identified Neurons with a Data-Driven Modeling Approach
title_full_unstemmed Probing the Dynamics of Identified Neurons with a Data-Driven Modeling Approach
title_short Probing the Dynamics of Identified Neurons with a Data-Driven Modeling Approach
title_sort probing the dynamics of identified neurons with a data-driven modeling approach
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2440808/
https://www.ncbi.nlm.nih.gov/pubmed/18612435
http://dx.doi.org/10.1371/journal.pone.0002627
work_keys_str_mv AT nowotnythomas probingthedynamicsofidentifiedneuronswithadatadrivenmodelingapproach
AT levirafael probingthedynamicsofidentifiedneuronswithadatadrivenmodelingapproach
AT selverstonalleni probingthedynamicsofidentifiedneuronswithadatadrivenmodelingapproach