Many Genbank Entries for Complete Microbial Genomes Violate the Genbank Standard

A survey of Genbank entries for complete microbial genomes reveals that the majority do not conform to the Genbank standard. Typical deviations from the Genbank standard include records with information in incorrect fields, addition of extraneous and confusing information within a field, and omissio...

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Detalles Bibliográficos
Autor principal: Karp, Peter D.
Formato: Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2001
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2447183/
https://www.ncbi.nlm.nih.gov/pubmed/18628940
http://dx.doi.org/10.1002/cfg.63
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author Karp, Peter D.
author_facet Karp, Peter D.
author_sort Karp, Peter D.
collection PubMed
description A survey of Genbank entries for complete microbial genomes reveals that the majority do not conform to the Genbank standard. Typical deviations from the Genbank standard include records with information in incorrect fields, addition of extraneous and confusing information within a field, and omission of useful fields. This situation results from two principal causes: genome centres do not submit Genbank records in the proper form and the Genbank, EMBL and DDBJ staffs do not enforce the database standards that they have defined.
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spelling pubmed-24471832008-07-14 Many Genbank Entries for Complete Microbial Genomes Violate the Genbank Standard Karp, Peter D. Comp Funct Genomics Research Article A survey of Genbank entries for complete microbial genomes reveals that the majority do not conform to the Genbank standard. Typical deviations from the Genbank standard include records with information in incorrect fields, addition of extraneous and confusing information within a field, and omission of useful fields. This situation results from two principal causes: genome centres do not submit Genbank records in the proper form and the Genbank, EMBL and DDBJ staffs do not enforce the database standards that they have defined. Hindawi Publishing Corporation 2001-02 /pmc/articles/PMC2447183/ /pubmed/18628940 http://dx.doi.org/10.1002/cfg.63 Text en Copyright © 2001 Hindawi Publishing Corporation. http://creativecommons.org/licenses/by/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Karp, Peter D.
Many Genbank Entries for Complete Microbial Genomes Violate the Genbank Standard
title Many Genbank Entries for Complete Microbial Genomes Violate the Genbank Standard
title_full Many Genbank Entries for Complete Microbial Genomes Violate the Genbank Standard
title_fullStr Many Genbank Entries for Complete Microbial Genomes Violate the Genbank Standard
title_full_unstemmed Many Genbank Entries for Complete Microbial Genomes Violate the Genbank Standard
title_short Many Genbank Entries for Complete Microbial Genomes Violate the Genbank Standard
title_sort many genbank entries for complete microbial genomes violate the genbank standard
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2447183/
https://www.ncbi.nlm.nih.gov/pubmed/18628940
http://dx.doi.org/10.1002/cfg.63
work_keys_str_mv AT karppeterd manygenbankentriesforcompletemicrobialgenomesviolatethegenbankstandard

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