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Unravelling the ORFan Puzzle

ORFans are open reading frames (ORFs) with no detectable sequence similarity to any other sequence in the databases. Each newly sequenced genome contains a significant number of ORFans. Therefore, ORFans entail interesting evolutionary puzzles. However, little can be learned about them using bioinfo...

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Detalles Bibliográficos
Autores principales: Siew, Naomi, Fischer, Daniel
Formato: Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2003
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2447361/
https://www.ncbi.nlm.nih.gov/pubmed/18629076
http://dx.doi.org/10.1002/cfg.311
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author Siew, Naomi
Fischer, Daniel
author_facet Siew, Naomi
Fischer, Daniel
author_sort Siew, Naomi
collection PubMed
description ORFans are open reading frames (ORFs) with no detectable sequence similarity to any other sequence in the databases. Each newly sequenced genome contains a significant number of ORFans. Therefore, ORFans entail interesting evolutionary puzzles. However, little can be learned about them using bioinformatics tools, and their study seems to have been underemphasized. Here we present some of the questions that the existence of so many ORFans have raised and review some of the studies aimed at understanding ORFans, their functions and their origins. These works have demonstrated that ORFans are an untapped source of research, requiring further computational and experimental studies.
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spelling pubmed-24473612008-07-14 Unravelling the ORFan Puzzle Siew, Naomi Fischer, Daniel Comp Funct Genomics Research Article ORFans are open reading frames (ORFs) with no detectable sequence similarity to any other sequence in the databases. Each newly sequenced genome contains a significant number of ORFans. Therefore, ORFans entail interesting evolutionary puzzles. However, little can be learned about them using bioinformatics tools, and their study seems to have been underemphasized. Here we present some of the questions that the existence of so many ORFans have raised and review some of the studies aimed at understanding ORFans, their functions and their origins. These works have demonstrated that ORFans are an untapped source of research, requiring further computational and experimental studies. Hindawi Publishing Corporation 2003-07 /pmc/articles/PMC2447361/ /pubmed/18629076 http://dx.doi.org/10.1002/cfg.311 Text en Copyright © 2003 Hindawi Publishing Corporation. http://creativecommons.org/licenses/by/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Siew, Naomi
Fischer, Daniel
Unravelling the ORFan Puzzle
title Unravelling the ORFan Puzzle
title_full Unravelling the ORFan Puzzle
title_fullStr Unravelling the ORFan Puzzle
title_full_unstemmed Unravelling the ORFan Puzzle
title_short Unravelling the ORFan Puzzle
title_sort unravelling the orfan puzzle
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2447361/
https://www.ncbi.nlm.nih.gov/pubmed/18629076
http://dx.doi.org/10.1002/cfg.311
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