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Determination of absolute structure using Bayesian statistics on Bijvoet differences
A new probabilistic approach is introduced for the determination of the absolute structure of a compound which is known to be enantiopure based on Bijvoet-pair intensity differences. The new method provides relative probabilities for different models of the chiral composition of the structure. The o...
Autores principales: | , , |
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Formato: | Texto |
Lenguaje: | English |
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International Union of Crystallography
2008
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2467520/ https://www.ncbi.nlm.nih.gov/pubmed/19461838 http://dx.doi.org/10.1107/S0021889807059870 |
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author | Hooft, Rob W. W. Straver, Leo H. Spek, Anthony L. |
author_facet | Hooft, Rob W. W. Straver, Leo H. Spek, Anthony L. |
author_sort | Hooft, Rob W. W. |
collection | PubMed |
description | A new probabilistic approach is introduced for the determination of the absolute structure of a compound which is known to be enantiopure based on Bijvoet-pair intensity differences. The new method provides relative probabilities for different models of the chiral composition of the structure. The outcome of this type of analysis can also be cast in the form of a new value, along with associated standard uncertainty, that resembles the value of the well known Flack x parameter. The standard uncertainty we obtain is often about half of the standard uncertainty in the value of the Flack x parameter. The proposed formalism is suited in particular to absolute configuration determination from diffraction data of biologically active (pharmaceutical) compounds where the strongest resonant scattering signal often comes from oxygen. It is shown that a reliable absolute configuration assignment in such cases can be made on the basis of Cu Kα data, and in some cases even with carefully measured Mo Kα data. |
format | Text |
id | pubmed-2467520 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-24675202009-03-05 Determination of absolute structure using Bayesian statistics on Bijvoet differences Hooft, Rob W. W. Straver, Leo H. Spek, Anthony L. J Appl Crystallogr Research Papers A new probabilistic approach is introduced for the determination of the absolute structure of a compound which is known to be enantiopure based on Bijvoet-pair intensity differences. The new method provides relative probabilities for different models of the chiral composition of the structure. The outcome of this type of analysis can also be cast in the form of a new value, along with associated standard uncertainty, that resembles the value of the well known Flack x parameter. The standard uncertainty we obtain is often about half of the standard uncertainty in the value of the Flack x parameter. The proposed formalism is suited in particular to absolute configuration determination from diffraction data of biologically active (pharmaceutical) compounds where the strongest resonant scattering signal often comes from oxygen. It is shown that a reliable absolute configuration assignment in such cases can be made on the basis of Cu Kα data, and in some cases even with carefully measured Mo Kα data. International Union of Crystallography 2008-02-01 2008-01-16 /pmc/articles/PMC2467520/ /pubmed/19461838 http://dx.doi.org/10.1107/S0021889807059870 Text en © International Union of Crystallography 2008 http://journals.iucr.org/services/termsofuse.html This is an open-access article distributed under the terms described at http://journals.iucr.org/services/termsofuse.html. |
spellingShingle | Research Papers Hooft, Rob W. W. Straver, Leo H. Spek, Anthony L. Determination of absolute structure using Bayesian statistics on Bijvoet differences |
title | Determination of absolute structure using Bayesian statistics on Bijvoet differences |
title_full | Determination of absolute structure using Bayesian statistics on Bijvoet differences |
title_fullStr | Determination of absolute structure using Bayesian statistics on Bijvoet differences |
title_full_unstemmed | Determination of absolute structure using Bayesian statistics on Bijvoet differences |
title_short | Determination of absolute structure using Bayesian statistics on Bijvoet differences |
title_sort | determination of absolute structure using bayesian statistics on bijvoet differences |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2467520/ https://www.ncbi.nlm.nih.gov/pubmed/19461838 http://dx.doi.org/10.1107/S0021889807059870 |
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