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Structural change in a B-DNA helix with hydrostatic pressure
Study of the effects of pressure on macromolecular structure improves our understanding of the forces governing structure, provides details on the relevance of cavities and packing in structure, increases our understanding of hydration and provides a basis to understand the biology of high-pressure...
Autores principales: | , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2008
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2475645/ https://www.ncbi.nlm.nih.gov/pubmed/18515837 http://dx.doi.org/10.1093/nar/gkn350 |
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author | Wilton, David J. Ghosh, Mahua Chary, K. V. A. Akasaka, Kazuyuki Williamson, Mike P. |
author_facet | Wilton, David J. Ghosh, Mahua Chary, K. V. A. Akasaka, Kazuyuki Williamson, Mike P. |
author_sort | Wilton, David J. |
collection | PubMed |
description | Study of the effects of pressure on macromolecular structure improves our understanding of the forces governing structure, provides details on the relevance of cavities and packing in structure, increases our understanding of hydration and provides a basis to understand the biology of high-pressure organisms. A study of DNA, in particular, helps us to understand how pressure can affect gene activity. Here we present the first high-resolution experimental study of B-DNA structure at high pressure, using NMR data acquired at pressures up to 200 MPa (2 kbar). The structure of DNA compresses very little, but is distorted so as to widen the minor groove, and to compress hydrogen bonds, with AT pairs compressing more than GC pairs. The minor groove changes are suggested to lead to a compression of the hydration water in the minor groove. |
format | Text |
id | pubmed-2475645 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-24756452008-07-21 Structural change in a B-DNA helix with hydrostatic pressure Wilton, David J. Ghosh, Mahua Chary, K. V. A. Akasaka, Kazuyuki Williamson, Mike P. Nucleic Acids Res Structural Biology Study of the effects of pressure on macromolecular structure improves our understanding of the forces governing structure, provides details on the relevance of cavities and packing in structure, increases our understanding of hydration and provides a basis to understand the biology of high-pressure organisms. A study of DNA, in particular, helps us to understand how pressure can affect gene activity. Here we present the first high-resolution experimental study of B-DNA structure at high pressure, using NMR data acquired at pressures up to 200 MPa (2 kbar). The structure of DNA compresses very little, but is distorted so as to widen the minor groove, and to compress hydrogen bonds, with AT pairs compressing more than GC pairs. The minor groove changes are suggested to lead to a compression of the hydration water in the minor groove. Oxford University Press 2008-07 2008-05-31 /pmc/articles/PMC2475645/ /pubmed/18515837 http://dx.doi.org/10.1093/nar/gkn350 Text en © 2008 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Structural Biology Wilton, David J. Ghosh, Mahua Chary, K. V. A. Akasaka, Kazuyuki Williamson, Mike P. Structural change in a B-DNA helix with hydrostatic pressure |
title | Structural change in a B-DNA helix with hydrostatic pressure |
title_full | Structural change in a B-DNA helix with hydrostatic pressure |
title_fullStr | Structural change in a B-DNA helix with hydrostatic pressure |
title_full_unstemmed | Structural change in a B-DNA helix with hydrostatic pressure |
title_short | Structural change in a B-DNA helix with hydrostatic pressure |
title_sort | structural change in a b-dna helix with hydrostatic pressure |
topic | Structural Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2475645/ https://www.ncbi.nlm.nih.gov/pubmed/18515837 http://dx.doi.org/10.1093/nar/gkn350 |
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