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Structural change in a B-DNA helix with hydrostatic pressure

Study of the effects of pressure on macromolecular structure improves our understanding of the forces governing structure, provides details on the relevance of cavities and packing in structure, increases our understanding of hydration and provides a basis to understand the biology of high-pressure...

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Autores principales: Wilton, David J., Ghosh, Mahua, Chary, K. V. A., Akasaka, Kazuyuki, Williamson, Mike P.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2475645/
https://www.ncbi.nlm.nih.gov/pubmed/18515837
http://dx.doi.org/10.1093/nar/gkn350
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author Wilton, David J.
Ghosh, Mahua
Chary, K. V. A.
Akasaka, Kazuyuki
Williamson, Mike P.
author_facet Wilton, David J.
Ghosh, Mahua
Chary, K. V. A.
Akasaka, Kazuyuki
Williamson, Mike P.
author_sort Wilton, David J.
collection PubMed
description Study of the effects of pressure on macromolecular structure improves our understanding of the forces governing structure, provides details on the relevance of cavities and packing in structure, increases our understanding of hydration and provides a basis to understand the biology of high-pressure organisms. A study of DNA, in particular, helps us to understand how pressure can affect gene activity. Here we present the first high-resolution experimental study of B-DNA structure at high pressure, using NMR data acquired at pressures up to 200 MPa (2 kbar). The structure of DNA compresses very little, but is distorted so as to widen the minor groove, and to compress hydrogen bonds, with AT pairs compressing more than GC pairs. The minor groove changes are suggested to lead to a compression of the hydration water in the minor groove.
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spelling pubmed-24756452008-07-21 Structural change in a B-DNA helix with hydrostatic pressure Wilton, David J. Ghosh, Mahua Chary, K. V. A. Akasaka, Kazuyuki Williamson, Mike P. Nucleic Acids Res Structural Biology Study of the effects of pressure on macromolecular structure improves our understanding of the forces governing structure, provides details on the relevance of cavities and packing in structure, increases our understanding of hydration and provides a basis to understand the biology of high-pressure organisms. A study of DNA, in particular, helps us to understand how pressure can affect gene activity. Here we present the first high-resolution experimental study of B-DNA structure at high pressure, using NMR data acquired at pressures up to 200 MPa (2 kbar). The structure of DNA compresses very little, but is distorted so as to widen the minor groove, and to compress hydrogen bonds, with AT pairs compressing more than GC pairs. The minor groove changes are suggested to lead to a compression of the hydration water in the minor groove. Oxford University Press 2008-07 2008-05-31 /pmc/articles/PMC2475645/ /pubmed/18515837 http://dx.doi.org/10.1093/nar/gkn350 Text en © 2008 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Structural Biology
Wilton, David J.
Ghosh, Mahua
Chary, K. V. A.
Akasaka, Kazuyuki
Williamson, Mike P.
Structural change in a B-DNA helix with hydrostatic pressure
title Structural change in a B-DNA helix with hydrostatic pressure
title_full Structural change in a B-DNA helix with hydrostatic pressure
title_fullStr Structural change in a B-DNA helix with hydrostatic pressure
title_full_unstemmed Structural change in a B-DNA helix with hydrostatic pressure
title_short Structural change in a B-DNA helix with hydrostatic pressure
title_sort structural change in a b-dna helix with hydrostatic pressure
topic Structural Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2475645/
https://www.ncbi.nlm.nih.gov/pubmed/18515837
http://dx.doi.org/10.1093/nar/gkn350
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