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Gene expression response in target organ and whole blood varies as a function of target organ injury phenotype

This report details the standardized experimental design and the different data streams that were collected (histopathology, clinical chemistry, hematology and gene expression from the target tissue (liver) and a bio-available tissue (blood)) after treatment with eight known hepatotoxicants (at mult...

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Autores principales: Lobenhofer, Edward K, Auman, J Todd, Blackshear, Pamela E, Boorman, Gary A, Bushel, Pierre R, Cunningham, Michael L, Fostel, Jennifer M, Gerrish, Kevin, Heinloth, Alexandra N, Irwin, Richard D, Malarkey, David E, Merrick, B Alex, Sieber, Stella O, Tucker, Charles J, Ward, Sandra M, Wilson, Ralph E, Hurban, Patrick, Tennant, Raymond W, Paules, Richard S
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2481421/
https://www.ncbi.nlm.nih.gov/pubmed/18570634
http://dx.doi.org/10.1186/gb-2008-9-6-r100
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author Lobenhofer, Edward K
Auman, J Todd
Blackshear, Pamela E
Boorman, Gary A
Bushel, Pierre R
Cunningham, Michael L
Fostel, Jennifer M
Gerrish, Kevin
Heinloth, Alexandra N
Irwin, Richard D
Malarkey, David E
Merrick, B Alex
Sieber, Stella O
Tucker, Charles J
Ward, Sandra M
Wilson, Ralph E
Hurban, Patrick
Tennant, Raymond W
Paules, Richard S
author_facet Lobenhofer, Edward K
Auman, J Todd
Blackshear, Pamela E
Boorman, Gary A
Bushel, Pierre R
Cunningham, Michael L
Fostel, Jennifer M
Gerrish, Kevin
Heinloth, Alexandra N
Irwin, Richard D
Malarkey, David E
Merrick, B Alex
Sieber, Stella O
Tucker, Charles J
Ward, Sandra M
Wilson, Ralph E
Hurban, Patrick
Tennant, Raymond W
Paules, Richard S
author_sort Lobenhofer, Edward K
collection PubMed
description This report details the standardized experimental design and the different data streams that were collected (histopathology, clinical chemistry, hematology and gene expression from the target tissue (liver) and a bio-available tissue (blood)) after treatment with eight known hepatotoxicants (at multiple time points and doses with multiple biological replicates). The results of the study demonstrate the classification of histopathological differences, likely reflecting differences in mechanisms of cell-specific toxicity, using either liver tissue or blood transcriptomic data.
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spelling pubmed-24814212008-07-24 Gene expression response in target organ and whole blood varies as a function of target organ injury phenotype Lobenhofer, Edward K Auman, J Todd Blackshear, Pamela E Boorman, Gary A Bushel, Pierre R Cunningham, Michael L Fostel, Jennifer M Gerrish, Kevin Heinloth, Alexandra N Irwin, Richard D Malarkey, David E Merrick, B Alex Sieber, Stella O Tucker, Charles J Ward, Sandra M Wilson, Ralph E Hurban, Patrick Tennant, Raymond W Paules, Richard S Genome Biol Method This report details the standardized experimental design and the different data streams that were collected (histopathology, clinical chemistry, hematology and gene expression from the target tissue (liver) and a bio-available tissue (blood)) after treatment with eight known hepatotoxicants (at multiple time points and doses with multiple biological replicates). The results of the study demonstrate the classification of histopathological differences, likely reflecting differences in mechanisms of cell-specific toxicity, using either liver tissue or blood transcriptomic data. BioMed Central 2008 2008-06-20 /pmc/articles/PMC2481421/ /pubmed/18570634 http://dx.doi.org/10.1186/gb-2008-9-6-r100 Text en Copyright © 2008 Lobenhofer et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Method
Lobenhofer, Edward K
Auman, J Todd
Blackshear, Pamela E
Boorman, Gary A
Bushel, Pierre R
Cunningham, Michael L
Fostel, Jennifer M
Gerrish, Kevin
Heinloth, Alexandra N
Irwin, Richard D
Malarkey, David E
Merrick, B Alex
Sieber, Stella O
Tucker, Charles J
Ward, Sandra M
Wilson, Ralph E
Hurban, Patrick
Tennant, Raymond W
Paules, Richard S
Gene expression response in target organ and whole blood varies as a function of target organ injury phenotype
title Gene expression response in target organ and whole blood varies as a function of target organ injury phenotype
title_full Gene expression response in target organ and whole blood varies as a function of target organ injury phenotype
title_fullStr Gene expression response in target organ and whole blood varies as a function of target organ injury phenotype
title_full_unstemmed Gene expression response in target organ and whole blood varies as a function of target organ injury phenotype
title_short Gene expression response in target organ and whole blood varies as a function of target organ injury phenotype
title_sort gene expression response in target organ and whole blood varies as a function of target organ injury phenotype
topic Method
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2481421/
https://www.ncbi.nlm.nih.gov/pubmed/18570634
http://dx.doi.org/10.1186/gb-2008-9-6-r100
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