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The importance of optical optimization in whole slide imaging (WSI) and digital pathology imaging
In the last 10 years, whole slide imaging (WSI) has seen impressive progress not only in image quality and scanning speed but also in the variety of systems available to pathologists. However, we have noticed that most systems have relatively simple optics axes and rely on software to optimize image...
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2008
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2500117/ https://www.ncbi.nlm.nih.gov/pubmed/18673497 http://dx.doi.org/10.1186/1746-1596-3-S1-S1 |
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author | Yagi, Yukako Gilbertson, John R |
author_facet | Yagi, Yukako Gilbertson, John R |
author_sort | Yagi, Yukako |
collection | PubMed |
description | In the last 10 years, whole slide imaging (WSI) has seen impressive progress not only in image quality and scanning speed but also in the variety of systems available to pathologists. However, we have noticed that most systems have relatively simple optics axes and rely on software to optimize image quality and colour balance. While much can be done in software, this study examines the importance of optics, in particular optical filters, in WSI. Optical resolution is a function of the wavelength of light used and the numerical aperture of the lens system (Resolution = (f) wavelength/2 NA). When illumining light is not conditioned correctly with filters, there is a tendency for the wavelength to shift to longer values (more red) because of the characteristics of the lamps in common use. Most microscopes (but remarkably few WSI devices) correct for this with ND filter for brightness and Blue filter (depends on the light source) for colour correction. Using H&E slides research microscopes (Axiophot, Carl Zeiss MicroImaging, Inc. NY. Eclipse 50i., Nikon Inc. NY) at 20×, an attached digital camera (SPOT RT741 Slider Color, Diagnosis Instruments., MI USA), and a filter set, we examined the effect of filters and software enhancement on digital image quality. The focus value (as evaluated by focus evaluation software developed in house and SPOT imaging Software v4.6) was used as a proxy for image quality. Resolution of tissue features was best with the use of both the Blue and ND filters (in addition to software enhancement). Images without filters but with software enhancement while superficially good, lacked some details of specimen morphology and were unclear compared with the images with filters. The results indicate that the appropriate use of optical filters could measurably improve the appearance and resolution of WSI images. |
format | Text |
id | pubmed-2500117 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-25001172008-08-08 The importance of optical optimization in whole slide imaging (WSI) and digital pathology imaging Yagi, Yukako Gilbertson, John R Diagn Pathol Proceedings In the last 10 years, whole slide imaging (WSI) has seen impressive progress not only in image quality and scanning speed but also in the variety of systems available to pathologists. However, we have noticed that most systems have relatively simple optics axes and rely on software to optimize image quality and colour balance. While much can be done in software, this study examines the importance of optics, in particular optical filters, in WSI. Optical resolution is a function of the wavelength of light used and the numerical aperture of the lens system (Resolution = (f) wavelength/2 NA). When illumining light is not conditioned correctly with filters, there is a tendency for the wavelength to shift to longer values (more red) because of the characteristics of the lamps in common use. Most microscopes (but remarkably few WSI devices) correct for this with ND filter for brightness and Blue filter (depends on the light source) for colour correction. Using H&E slides research microscopes (Axiophot, Carl Zeiss MicroImaging, Inc. NY. Eclipse 50i., Nikon Inc. NY) at 20×, an attached digital camera (SPOT RT741 Slider Color, Diagnosis Instruments., MI USA), and a filter set, we examined the effect of filters and software enhancement on digital image quality. The focus value (as evaluated by focus evaluation software developed in house and SPOT imaging Software v4.6) was used as a proxy for image quality. Resolution of tissue features was best with the use of both the Blue and ND filters (in addition to software enhancement). Images without filters but with software enhancement while superficially good, lacked some details of specimen morphology and were unclear compared with the images with filters. The results indicate that the appropriate use of optical filters could measurably improve the appearance and resolution of WSI images. BioMed Central 2008-07-15 /pmc/articles/PMC2500117/ /pubmed/18673497 http://dx.doi.org/10.1186/1746-1596-3-S1-S1 Text en Copyright © 2008 Yagi and Gilbertson; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Proceedings Yagi, Yukako Gilbertson, John R The importance of optical optimization in whole slide imaging (WSI) and digital pathology imaging |
title | The importance of optical optimization in whole slide imaging (WSI) and digital pathology imaging |
title_full | The importance of optical optimization in whole slide imaging (WSI) and digital pathology imaging |
title_fullStr | The importance of optical optimization in whole slide imaging (WSI) and digital pathology imaging |
title_full_unstemmed | The importance of optical optimization in whole slide imaging (WSI) and digital pathology imaging |
title_short | The importance of optical optimization in whole slide imaging (WSI) and digital pathology imaging |
title_sort | importance of optical optimization in whole slide imaging (wsi) and digital pathology imaging |
topic | Proceedings |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2500117/ https://www.ncbi.nlm.nih.gov/pubmed/18673497 http://dx.doi.org/10.1186/1746-1596-3-S1-S1 |
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