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Heterogeneity in multistage carcinogenesis and mixture modeling
Carcinogenesis is commonly described as a multistage process, in which stem cells are transformed into cancer cells via a series of mutations. In this article, we consider extensions of the multistage carcinogenesis model by mixture modeling. This approach allows us to describe population heterogene...
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2008
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2515834/ https://www.ncbi.nlm.nih.gov/pubmed/18644142 http://dx.doi.org/10.1186/1742-4682-5-13 |
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author | Gsteiger, Sandro Morgenthaler, Stephan |
author_facet | Gsteiger, Sandro Morgenthaler, Stephan |
author_sort | Gsteiger, Sandro |
collection | PubMed |
description | Carcinogenesis is commonly described as a multistage process, in which stem cells are transformed into cancer cells via a series of mutations. In this article, we consider extensions of the multistage carcinogenesis model by mixture modeling. This approach allows us to describe population heterogeneity in a biologically meaningful way. We focus on finite mixture models, for which we prove identifiability. These models are applied to human lung cancer data from several birth cohorts. Maximum likelihood estimation does not perform well in this application due to the heavy censoring in our data. We thus use analytic graduation instead. Very good fits are achieved for models that combine a small high risk group with a large group that is quasi immune. |
format | Text |
id | pubmed-2515834 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-25158342008-08-14 Heterogeneity in multistage carcinogenesis and mixture modeling Gsteiger, Sandro Morgenthaler, Stephan Theor Biol Med Model Research Carcinogenesis is commonly described as a multistage process, in which stem cells are transformed into cancer cells via a series of mutations. In this article, we consider extensions of the multistage carcinogenesis model by mixture modeling. This approach allows us to describe population heterogeneity in a biologically meaningful way. We focus on finite mixture models, for which we prove identifiability. These models are applied to human lung cancer data from several birth cohorts. Maximum likelihood estimation does not perform well in this application due to the heavy censoring in our data. We thus use analytic graduation instead. Very good fits are achieved for models that combine a small high risk group with a large group that is quasi immune. BioMed Central 2008-07-21 /pmc/articles/PMC2515834/ /pubmed/18644142 http://dx.doi.org/10.1186/1742-4682-5-13 Text en Copyright © 2008 Gsteiger and Morgenthaler; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Gsteiger, Sandro Morgenthaler, Stephan Heterogeneity in multistage carcinogenesis and mixture modeling |
title | Heterogeneity in multistage carcinogenesis and mixture modeling |
title_full | Heterogeneity in multistage carcinogenesis and mixture modeling |
title_fullStr | Heterogeneity in multistage carcinogenesis and mixture modeling |
title_full_unstemmed | Heterogeneity in multistage carcinogenesis and mixture modeling |
title_short | Heterogeneity in multistage carcinogenesis and mixture modeling |
title_sort | heterogeneity in multistage carcinogenesis and mixture modeling |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2515834/ https://www.ncbi.nlm.nih.gov/pubmed/18644142 http://dx.doi.org/10.1186/1742-4682-5-13 |
work_keys_str_mv | AT gsteigersandro heterogeneityinmultistagecarcinogenesisandmixturemodeling AT morgenthalerstephan heterogeneityinmultistagecarcinogenesisandmixturemodeling |