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Heterogeneity in multistage carcinogenesis and mixture modeling

Carcinogenesis is commonly described as a multistage process, in which stem cells are transformed into cancer cells via a series of mutations. In this article, we consider extensions of the multistage carcinogenesis model by mixture modeling. This approach allows us to describe population heterogene...

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Detalles Bibliográficos
Autores principales: Gsteiger, Sandro, Morgenthaler, Stephan
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2515834/
https://www.ncbi.nlm.nih.gov/pubmed/18644142
http://dx.doi.org/10.1186/1742-4682-5-13
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author Gsteiger, Sandro
Morgenthaler, Stephan
author_facet Gsteiger, Sandro
Morgenthaler, Stephan
author_sort Gsteiger, Sandro
collection PubMed
description Carcinogenesis is commonly described as a multistage process, in which stem cells are transformed into cancer cells via a series of mutations. In this article, we consider extensions of the multistage carcinogenesis model by mixture modeling. This approach allows us to describe population heterogeneity in a biologically meaningful way. We focus on finite mixture models, for which we prove identifiability. These models are applied to human lung cancer data from several birth cohorts. Maximum likelihood estimation does not perform well in this application due to the heavy censoring in our data. We thus use analytic graduation instead. Very good fits are achieved for models that combine a small high risk group with a large group that is quasi immune.
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spelling pubmed-25158342008-08-14 Heterogeneity in multistage carcinogenesis and mixture modeling Gsteiger, Sandro Morgenthaler, Stephan Theor Biol Med Model Research Carcinogenesis is commonly described as a multistage process, in which stem cells are transformed into cancer cells via a series of mutations. In this article, we consider extensions of the multistage carcinogenesis model by mixture modeling. This approach allows us to describe population heterogeneity in a biologically meaningful way. We focus on finite mixture models, for which we prove identifiability. These models are applied to human lung cancer data from several birth cohorts. Maximum likelihood estimation does not perform well in this application due to the heavy censoring in our data. We thus use analytic graduation instead. Very good fits are achieved for models that combine a small high risk group with a large group that is quasi immune. BioMed Central 2008-07-21 /pmc/articles/PMC2515834/ /pubmed/18644142 http://dx.doi.org/10.1186/1742-4682-5-13 Text en Copyright © 2008 Gsteiger and Morgenthaler; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Gsteiger, Sandro
Morgenthaler, Stephan
Heterogeneity in multistage carcinogenesis and mixture modeling
title Heterogeneity in multistage carcinogenesis and mixture modeling
title_full Heterogeneity in multistage carcinogenesis and mixture modeling
title_fullStr Heterogeneity in multistage carcinogenesis and mixture modeling
title_full_unstemmed Heterogeneity in multistage carcinogenesis and mixture modeling
title_short Heterogeneity in multistage carcinogenesis and mixture modeling
title_sort heterogeneity in multistage carcinogenesis and mixture modeling
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2515834/
https://www.ncbi.nlm.nih.gov/pubmed/18644142
http://dx.doi.org/10.1186/1742-4682-5-13
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