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Ribotoxin genes in isolates of Aspergillus section Clavati
Ribotoxins are ribosome inactivator proteins with high specificity against the sarcin/ricin domain of the 28S ribosomal RNA. We examined the presence of ribotoxin genes in isolates of species recently assigned to Aspergillus section Clavati using specific primer pairs. All species assigned to this s...
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Formato: | Texto |
Lenguaje: | English |
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Springer Netherlands
2008
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2519116/ https://www.ncbi.nlm.nih.gov/pubmed/18600469 http://dx.doi.org/10.1007/s10482-008-9266-7 |
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author | Varga, János Samson, Robert A. |
author_facet | Varga, János Samson, Robert A. |
author_sort | Varga, János |
collection | PubMed |
description | Ribotoxins are ribosome inactivator proteins with high specificity against the sarcin/ricin domain of the 28S ribosomal RNA. We examined the presence of ribotoxin genes in isolates of species recently assigned to Aspergillus section Clavati using specific primer pairs. All species assigned to this section have been found to carry ribotoxin genes. Phylogenetic analysis of the sequences of the amplified gene fragments allowed us to classify the genes to different groups including the α-sarcin, gigantin, c-sarcin and mitogillin/restrictocin families. Two species, A. longivesica and N. acanthosporus produced ribotoxins which were only distantly related to gigantins and c-sarcins, respectively. Comparison of the protein sequences of the genes to known ribotoxin sequences revealed that all of them carry the presumed catalytic residues of ribotoxins, the cystein residues, and also the two Trp residues of α-sarcin conserved in all ribotoxins known so far. These data indicate that these genes probably encode active ribotoxins. Further studies are in progress to examine the secretion and activities of these new ribotoxins. |
format | Text |
id | pubmed-2519116 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | Springer Netherlands |
record_format | MEDLINE/PubMed |
spelling | pubmed-25191162008-08-25 Ribotoxin genes in isolates of Aspergillus section Clavati Varga, János Samson, Robert A. Antonie Van Leeuwenhoek Short Communication Ribotoxins are ribosome inactivator proteins with high specificity against the sarcin/ricin domain of the 28S ribosomal RNA. We examined the presence of ribotoxin genes in isolates of species recently assigned to Aspergillus section Clavati using specific primer pairs. All species assigned to this section have been found to carry ribotoxin genes. Phylogenetic analysis of the sequences of the amplified gene fragments allowed us to classify the genes to different groups including the α-sarcin, gigantin, c-sarcin and mitogillin/restrictocin families. Two species, A. longivesica and N. acanthosporus produced ribotoxins which were only distantly related to gigantins and c-sarcins, respectively. Comparison of the protein sequences of the genes to known ribotoxin sequences revealed that all of them carry the presumed catalytic residues of ribotoxins, the cystein residues, and also the two Trp residues of α-sarcin conserved in all ribotoxins known so far. These data indicate that these genes probably encode active ribotoxins. Further studies are in progress to examine the secretion and activities of these new ribotoxins. Springer Netherlands 2008-07-04 2008 /pmc/articles/PMC2519116/ /pubmed/18600469 http://dx.doi.org/10.1007/s10482-008-9266-7 Text en © The Author(s) 2008 https://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution Noncommercial License which permits any noncommercial use, distribution, and reproduction in any medium, provided the original author(s) and source are credited. |
spellingShingle | Short Communication Varga, János Samson, Robert A. Ribotoxin genes in isolates of Aspergillus section Clavati |
title | Ribotoxin genes in isolates of Aspergillus section Clavati |
title_full | Ribotoxin genes in isolates of Aspergillus section Clavati |
title_fullStr | Ribotoxin genes in isolates of Aspergillus section Clavati |
title_full_unstemmed | Ribotoxin genes in isolates of Aspergillus section Clavati |
title_short | Ribotoxin genes in isolates of Aspergillus section Clavati |
title_sort | ribotoxin genes in isolates of aspergillus section clavati |
topic | Short Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2519116/ https://www.ncbi.nlm.nih.gov/pubmed/18600469 http://dx.doi.org/10.1007/s10482-008-9266-7 |
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