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Meta-analysis of SUMO1
An abundantly growing body of literature implicates conjugation of SUMO in the regulation of many proteins and processes, yet the regulation of SUMO pathways is poorly understood. To gain insight into the players in the SUMO1 pathway I have performed an in-silico co-expression meta-analysis of SUMO1...
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2008
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2525640/ https://www.ncbi.nlm.nih.gov/pubmed/18710513 http://dx.doi.org/10.1186/1756-0500-1-60 |
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author | Wilson, Brian J |
author_facet | Wilson, Brian J |
author_sort | Wilson, Brian J |
collection | PubMed |
description | An abundantly growing body of literature implicates conjugation of SUMO in the regulation of many proteins and processes, yet the regulation of SUMO pathways is poorly understood. To gain insight into the players in the SUMO1 pathway I have performed an in-silico co-expression meta-analysis of SUMO1, comparing many different multi-microarray studies of various normal and human tumour tissues, from the Oncomine database. This serves as a data-driven predictor of pathway partners of SUMO1. While the data obtained need to be confirmed by future independent experiments and can currently only be considered a hypothesis, results implicate defender against cell death (DAD1) and the anti-apoptotic DEK oncogene as new pathway partners of SUMO1. |
format | Text |
id | pubmed-2525640 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-25256402008-08-27 Meta-analysis of SUMO1 Wilson, Brian J BMC Res Notes Correspondence An abundantly growing body of literature implicates conjugation of SUMO in the regulation of many proteins and processes, yet the regulation of SUMO pathways is poorly understood. To gain insight into the players in the SUMO1 pathway I have performed an in-silico co-expression meta-analysis of SUMO1, comparing many different multi-microarray studies of various normal and human tumour tissues, from the Oncomine database. This serves as a data-driven predictor of pathway partners of SUMO1. While the data obtained need to be confirmed by future independent experiments and can currently only be considered a hypothesis, results implicate defender against cell death (DAD1) and the anti-apoptotic DEK oncogene as new pathway partners of SUMO1. BioMed Central 2008-07-31 /pmc/articles/PMC2525640/ /pubmed/18710513 http://dx.doi.org/10.1186/1756-0500-1-60 Text en Copyright © 2008 Wilson; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Correspondence Wilson, Brian J Meta-analysis of SUMO1 |
title | Meta-analysis of SUMO1 |
title_full | Meta-analysis of SUMO1 |
title_fullStr | Meta-analysis of SUMO1 |
title_full_unstemmed | Meta-analysis of SUMO1 |
title_short | Meta-analysis of SUMO1 |
title_sort | meta-analysis of sumo1 |
topic | Correspondence |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2525640/ https://www.ncbi.nlm.nih.gov/pubmed/18710513 http://dx.doi.org/10.1186/1756-0500-1-60 |
work_keys_str_mv | AT wilsonbrianj metaanalysisofsumo1 |