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Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis

We have compiled the p73-mediated cell cycle arrest and apoptosis pathways. p73 is a member of the p53 family, consisting of p53, p63 and p73. p73 exists in several isoforms, presenting different domain structures. p73 functions not only as a tumor suppressor in apoptosis but also as differentiator...

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Autores principales: Tozluoğlu, Melda, Karaca, Ezgi, Haliloglu, Turkan, Nussinov, Ruth
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2528188/
https://www.ncbi.nlm.nih.gov/pubmed/18660513
http://dx.doi.org/10.1093/nar/gkn481
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author Tozluoğlu, Melda
Karaca, Ezgi
Haliloglu, Turkan
Nussinov, Ruth
author_facet Tozluoğlu, Melda
Karaca, Ezgi
Haliloglu, Turkan
Nussinov, Ruth
author_sort Tozluoğlu, Melda
collection PubMed
description We have compiled the p73-mediated cell cycle arrest and apoptosis pathways. p73 is a member of the p53 family, consisting of p53, p63 and p73. p73 exists in several isoforms, presenting different domain structures. p73 functions not only as a tumor suppressor in apoptosis but also as differentiator in embryo development. p53 mutations are responsible for half of the human cancers; p73 can partially substitute mutant p53 as tumor suppressor. The pathways we assembled create a p73-centered network consisting of 53 proteins and 176 interactions. We clustered our network into five functional categories: Upregulation, Activation, Suppression, Transcriptional Activity and Degradation. Our literature searches led to discovering proteins (c-Jun and pRb) with apparent opposing functional effects; these indicate either currently missing proteins and interactions or experimental misidentification or functional annotation. For convenience, here we present the p73 network using the molecular interaction map (MIM) notation. The p73 MIM is unique amongst MIMs, since it further implements detailed domain features. We highlight shared pathways between p53 and p73. We expect that the compiled and organized network would be useful to p53 family-based studies.
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spelling pubmed-25281882009-01-22 Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis Tozluoğlu, Melda Karaca, Ezgi Haliloglu, Turkan Nussinov, Ruth Nucleic Acids Res Molecular Biology We have compiled the p73-mediated cell cycle arrest and apoptosis pathways. p73 is a member of the p53 family, consisting of p53, p63 and p73. p73 exists in several isoforms, presenting different domain structures. p73 functions not only as a tumor suppressor in apoptosis but also as differentiator in embryo development. p53 mutations are responsible for half of the human cancers; p73 can partially substitute mutant p53 as tumor suppressor. The pathways we assembled create a p73-centered network consisting of 53 proteins and 176 interactions. We clustered our network into five functional categories: Upregulation, Activation, Suppression, Transcriptional Activity and Degradation. Our literature searches led to discovering proteins (c-Jun and pRb) with apparent opposing functional effects; these indicate either currently missing proteins and interactions or experimental misidentification or functional annotation. For convenience, here we present the p73 network using the molecular interaction map (MIM) notation. The p73 MIM is unique amongst MIMs, since it further implements detailed domain features. We highlight shared pathways between p53 and p73. We expect that the compiled and organized network would be useful to p53 family-based studies. Oxford University Press 2008-09 2008-07-26 /pmc/articles/PMC2528188/ /pubmed/18660513 http://dx.doi.org/10.1093/nar/gkn481 Text en © 2008 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Molecular Biology
Tozluoğlu, Melda
Karaca, Ezgi
Haliloglu, Turkan
Nussinov, Ruth
Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis
title Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis
title_full Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis
title_fullStr Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis
title_full_unstemmed Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis
title_short Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis
title_sort cataloging and organizing p73 interactions in cell cycle arrest and apoptosis
topic Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2528188/
https://www.ncbi.nlm.nih.gov/pubmed/18660513
http://dx.doi.org/10.1093/nar/gkn481
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