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Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis
We have compiled the p73-mediated cell cycle arrest and apoptosis pathways. p73 is a member of the p53 family, consisting of p53, p63 and p73. p73 exists in several isoforms, presenting different domain structures. p73 functions not only as a tumor suppressor in apoptosis but also as differentiator...
Autores principales: | , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2008
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2528188/ https://www.ncbi.nlm.nih.gov/pubmed/18660513 http://dx.doi.org/10.1093/nar/gkn481 |
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author | Tozluoğlu, Melda Karaca, Ezgi Haliloglu, Turkan Nussinov, Ruth |
author_facet | Tozluoğlu, Melda Karaca, Ezgi Haliloglu, Turkan Nussinov, Ruth |
author_sort | Tozluoğlu, Melda |
collection | PubMed |
description | We have compiled the p73-mediated cell cycle arrest and apoptosis pathways. p73 is a member of the p53 family, consisting of p53, p63 and p73. p73 exists in several isoforms, presenting different domain structures. p73 functions not only as a tumor suppressor in apoptosis but also as differentiator in embryo development. p53 mutations are responsible for half of the human cancers; p73 can partially substitute mutant p53 as tumor suppressor. The pathways we assembled create a p73-centered network consisting of 53 proteins and 176 interactions. We clustered our network into five functional categories: Upregulation, Activation, Suppression, Transcriptional Activity and Degradation. Our literature searches led to discovering proteins (c-Jun and pRb) with apparent opposing functional effects; these indicate either currently missing proteins and interactions or experimental misidentification or functional annotation. For convenience, here we present the p73 network using the molecular interaction map (MIM) notation. The p73 MIM is unique amongst MIMs, since it further implements detailed domain features. We highlight shared pathways between p53 and p73. We expect that the compiled and organized network would be useful to p53 family-based studies. |
format | Text |
id | pubmed-2528188 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-25281882009-01-22 Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis Tozluoğlu, Melda Karaca, Ezgi Haliloglu, Turkan Nussinov, Ruth Nucleic Acids Res Molecular Biology We have compiled the p73-mediated cell cycle arrest and apoptosis pathways. p73 is a member of the p53 family, consisting of p53, p63 and p73. p73 exists in several isoforms, presenting different domain structures. p73 functions not only as a tumor suppressor in apoptosis but also as differentiator in embryo development. p53 mutations are responsible for half of the human cancers; p73 can partially substitute mutant p53 as tumor suppressor. The pathways we assembled create a p73-centered network consisting of 53 proteins and 176 interactions. We clustered our network into five functional categories: Upregulation, Activation, Suppression, Transcriptional Activity and Degradation. Our literature searches led to discovering proteins (c-Jun and pRb) with apparent opposing functional effects; these indicate either currently missing proteins and interactions or experimental misidentification or functional annotation. For convenience, here we present the p73 network using the molecular interaction map (MIM) notation. The p73 MIM is unique amongst MIMs, since it further implements detailed domain features. We highlight shared pathways between p53 and p73. We expect that the compiled and organized network would be useful to p53 family-based studies. Oxford University Press 2008-09 2008-07-26 /pmc/articles/PMC2528188/ /pubmed/18660513 http://dx.doi.org/10.1093/nar/gkn481 Text en © 2008 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Molecular Biology Tozluoğlu, Melda Karaca, Ezgi Haliloglu, Turkan Nussinov, Ruth Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis |
title | Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis |
title_full | Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis |
title_fullStr | Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis |
title_full_unstemmed | Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis |
title_short | Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis |
title_sort | cataloging and organizing p73 interactions in cell cycle arrest and apoptosis |
topic | Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2528188/ https://www.ncbi.nlm.nih.gov/pubmed/18660513 http://dx.doi.org/10.1093/nar/gkn481 |
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