Cargando…

Multiple displacement amplification for complex mixtures of DNA fragments

BACKGROUND: A fundamental requirement for genomic studies is the availability of genetic material of good quality and quantity. The desired quantity and quality are often hard to obtain when target DNA is composed of complex mixtures of relatively short DNA fragments. Here, we sought to develop a me...

Descripción completa

Detalles Bibliográficos
Autores principales:	Shoaib, Muhammad, Baconnais, Sonia, Mechold, Undine, Le Cam, Eric, Lipinski, Marc, Ogryzko, Vasily
Formato:	Texto
Lenguaje:	English
Publicado:	BioMed Central 2008
Materias:	Methodology Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2553422/ https://www.ncbi.nlm.nih.gov/pubmed/18793430 http://dx.doi.org/10.1186/1471-2164-9-415

Ejemplares similares

Oligoribonuclease is a common downstream target of lithium-induced pAp accumulation in Escherichia coli and human cells
por: Mechold, Undine, et al.
Publicado: (2006)

Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis
por: Fang, Ming, et al.
Publicado: (2009)

YtqI from Bacillus subtilis has both oligoribonuclease and pAp-phosphatase activity
por: Mechold, Undine, et al.
Publicado: (2007)

3′-5′ Phosphoadenosine phosphate is an inhibitor of PARP-1 and a potential mediator of the lithium-dependent inhibition of PARP-1 in vivo
por: Toledano, Elie, et al.
Publicado: (2012)

Mechanism of chimera formation during the Multiple Displacement Amplification reaction
por: Lasken, Roger S, et al.
Publicado: (2007)

Improved Multiple Displacement Amplification (iMDA) and Ultraclean Reagents
por: Motley, S Timothy, et al.
Publicado: (2014)

Universal Multiplex PCR: a novel method of simultaneous amplification of multiple DNA fragments
por: Wen, Daxing, et al.
Publicado: (2012)

Effects of DNA mass on multiple displacement whole genome amplification and genotyping performance
por: Bergen, Andrew W, et al.
Publicado: (2005)

On protein abundance distributions in complex mixtures
por: Koziol, JA, et al.
Publicado: (2013)

The use of multiple displacement amplification to amplify complex DNA libraries
por: Fullwood, Melissa J., et al.
Publicado: (2008)

Chimera: The spoiler in multiple displacement amplification
por: Lu, Na, et al.
Publicado: (2023)

Caught in the middle with multiple displacement amplification: the myth of pooling for avoiding multiple displacement amplification bias in a metagenome
por: Marine, Rachel, et al.
Publicado: (2014)

Simultaneous splicing of multiple DNA fragments in one PCR reaction
por: Luo, Wei-Gui, et al.
Publicado: (2013)

Genome amplification of single sperm using multiple displacement amplification
por: Jiang, Zhengwen, et al.
Publicado: (2005)

Actin activates Pseudomonas aeruginosa ExoY nucleotidyl cyclase toxin and ExoY-like effector domains from MARTX toxins
por: Belyy, Alexander, et al.
Publicado: (2016)

PUB-NChIP—“in vivo biotinylation” approach to study chromatin in proximity to a protein of interest
por: Shoaib, Muhammad, et al.
Publicado: (2013)

Molecular turnover, the H3.3 dilemma and organismal aging (hypothesis)
por: Saade, Evelyne, et al.
Publicado: (2015)

Trypanosoma cruzi specific mRNA amplification by in vitro transcription improves parasite transcriptomics in host-parasite RNA mixtures
por: Kessler, Rafael Luis, et al.
Publicado: (2017)

Displacement affinity chromatography of protein phosphatase one (PP1) complexes
por: Moorhead, Greg BG, et al.
Publicado: (2008)

Large fragment Bst DNA polymerase for whole genome amplification of DNA from formalin-fixed paraffin-embedded tissues
por: Aviel-Ronen, Sarit, et al.
Publicado: (2006)

Method combining BAC film and positive staining for the characterization of DNA intermediates by dark-field electron microscopy
por: Benureau, Yann, et al.
Publicado: (2020)

Detection of monkeypox virus using helicase dependent amplification and recombinase polymerase amplification combined with lateral flow test
por: Gulinaizhaer, Abudushalamu, et al.
Publicado: (2023)

Topokaryotyping demonstrates single cell variability and stress dependent variations in nuclear envelope associated domains
por: Jurisic, Anamarija, et al.
Publicado: (2018)

Rapid Detection of high-level oncogene amplifications in ultrasonic surgical aspirations of brain tumors
por: Truong, Long N, et al.
Publicado: (2012)

Enhanced sequencing coverage with digital droplet multiple displacement amplification
por: Sidore, Angus M., et al.
Publicado: (2016)

Mechanism of actin-dependent activation of nucleotidyl cyclase toxins from bacterial human pathogens
por: Belyy, Alexander, et al.
Publicado: (2021)

Loop-mediated isothermal amplification for the detection of goose circovirus
por: Woźniakowski, Grzegorz, et al.
Publicado: (2012)

Feature selection for gene prediction in metagenomic fragments
por: Al-Ajlan, Amani, et al.
Publicado: (2018)

A forward-backward fragment assembling algorithm for the identification of genomic amplification and deletion breakpoints using high-density single nucleotide polymorphism (SNP) array
por: Yu, Tianwei, et al.
Publicado: (2007)

Comparison of Multiple Displacement Amplification (MDA) and Multiple Annealing and Looping-Based Amplification Cycles (MALBAC) in Single-Cell Sequencing
por: Chen, Minfeng, et al.
Publicado: (2014)

Temporary organ displacement coupled with image-guided, intensity-modulated radiotherapy for paraspinal tumors
por: Katsoulakis, Evangelia, et al.
Publicado: (2013)

Development of novel cellular histone-binding and chromatin-displacement assays for bromodomain drug discovery
por: Zhan, Yanai, et al.
Publicado: (2015)

Required displacement factors for evaluating and comparing climate impacts of intensive and extensive forestry in Germany
por: Christian, Buschbeck, et al.
Publicado: (2022)

Multiple strand displacement amplification of mitochondrial DNA from clinical samples
por: Maragh, Samantha, et al.
Publicado: (2008)

Testing the Reproducibility of Multiple Displacement Amplification on Genomes of Clonal Endosymbiont Populations
por: Ellegaard, Kirsten Maren, et al.
Publicado: (2013)

Hotspot Selective Preference of the Chimeric Sequences Formed in Multiple Displacement Amplification
por: Tu, Jing, et al.
Publicado: (2017)

Barcoded multiple displacement amplification for high coverage sequencing in spatial genomics
por: Kim, Jinhyun, et al.
Publicado: (2023)

Evaluation of multiplex ligation dependent probe amplification (MLPA) for identification of acute lymphoblastic leukemia with an intrachromosomal amplification of chromosome 21 (iAMP21) in a Brazilian population
por: Fuka, Gerhard, et al.
Publicado: (2015)

A molecular fragment cheminformatics roadmap for mesoscopic simulation
por: Truszkowski, Andreas, et al.
Publicado: (2014)

A framework for assessing 16S rRNA marker-gene survey data analysis methods using mixtures.
por: Olson, Nathan D., et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_pt02cnal8r1v7k8c6agqmh0m47