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OmicsViz: Cytoscape plug-in for visualizing omics data across species
Motivation: OmicsViz is a Cytoscape plug-in for mapping and visualizing large-scale omics datasets across species, including those with many-to-many mappings between homologs. This allows users to map their data onto pathways of related model organisms. Mapping schemas across species or different ex...
| Autores principales: | , |
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| Formato: | Texto |
| Lenguaje: | English |
| Publicado: |
Oxford University Press
2008
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2572702/ https://www.ncbi.nlm.nih.gov/pubmed/18779234 http://dx.doi.org/10.1093/bioinformatics/btn473 |
| Sumario: | Motivation: OmicsViz is a Cytoscape plug-in for mapping and visualizing large-scale omics datasets across species, including those with many-to-many mappings between homologs. This allows users to map their data onto pathways of related model organisms. Mapping schemas across species or different experimental protocols allow users to comparatively analyze the omics data. The data can also be visualized in parallel-coordinate plots. Availability: The latest version of OmicsViz with documentation, tutorial and jar files can be downloaded from http://metnet.vrac.iastate.edu/MetNet_fcmodeler.htm Contact: julied@iastate.edu |
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