Cargando…

Probabilistic Models for Continuous Ontogenetic Transition Processes

BACKGROUND: Probabilistic reaction norms (PRNs) are an extension of the concept of reaction norms, developed to account for stochasticity in ontogenetic transitions. However, logistic regression based PRNs are restricted to discrete time intervals, whereas previously proposed models for continuous t...

Descripción completa

Detalles Bibliográficos
Autores principales: Kuparinen, Anna, O'Hara, Robert B., Merilä, Juha
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2577064/
https://www.ncbi.nlm.nih.gov/pubmed/18997864
http://dx.doi.org/10.1371/journal.pone.0003677
_version_ 1782160460226756608
author Kuparinen, Anna
O'Hara, Robert B.
Merilä, Juha
author_facet Kuparinen, Anna
O'Hara, Robert B.
Merilä, Juha
author_sort Kuparinen, Anna
collection PubMed
description BACKGROUND: Probabilistic reaction norms (PRNs) are an extension of the concept of reaction norms, developed to account for stochasticity in ontogenetic transitions. However, logistic regression based PRNs are restricted to discrete time intervals, whereas previously proposed models for continuous transitions are demanding in terms of modelling effort and data needed. METHODOLOGY/PRINCIPAL FINDINGS: Here we introduce two alternative approaches for the probabilistic modelling of continuous ontogenetic transitions. The models are simplified in their description of forces underlying transitions, thus being empirical rather than mechanistic by their nature, but therefore applicable to situations where data and prior knowledge of transitions are limited. The models provide continuous time description of the transition pattern, insights into how it is affected by covariates, at the same time allowing for fine scale transition probability predictions. Performance of the models is demonstrated using empirical data on metamorphosis in common frogs (Rana temporaria) reared in a common garden experiment. CONCLUSIONS/SIGNIFICANCE: As being user-friendly and methodologically easily accessible, the models introduced in this study aid the concept of probabilistic reaction norms becoming as general and applicable tool in the studies of life-history variation as the deterministic reaction norms are today.
format Text
id pubmed-2577064
institution National Center for Biotechnology Information
language English
publishDate 2008
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-25770642008-11-10 Probabilistic Models for Continuous Ontogenetic Transition Processes Kuparinen, Anna O'Hara, Robert B. Merilä, Juha PLoS One Research Article BACKGROUND: Probabilistic reaction norms (PRNs) are an extension of the concept of reaction norms, developed to account for stochasticity in ontogenetic transitions. However, logistic regression based PRNs are restricted to discrete time intervals, whereas previously proposed models for continuous transitions are demanding in terms of modelling effort and data needed. METHODOLOGY/PRINCIPAL FINDINGS: Here we introduce two alternative approaches for the probabilistic modelling of continuous ontogenetic transitions. The models are simplified in their description of forces underlying transitions, thus being empirical rather than mechanistic by their nature, but therefore applicable to situations where data and prior knowledge of transitions are limited. The models provide continuous time description of the transition pattern, insights into how it is affected by covariates, at the same time allowing for fine scale transition probability predictions. Performance of the models is demonstrated using empirical data on metamorphosis in common frogs (Rana temporaria) reared in a common garden experiment. CONCLUSIONS/SIGNIFICANCE: As being user-friendly and methodologically easily accessible, the models introduced in this study aid the concept of probabilistic reaction norms becoming as general and applicable tool in the studies of life-history variation as the deterministic reaction norms are today. Public Library of Science 2008-11-10 /pmc/articles/PMC2577064/ /pubmed/18997864 http://dx.doi.org/10.1371/journal.pone.0003677 Text en Kuparinen et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Kuparinen, Anna
O'Hara, Robert B.
Merilä, Juha
Probabilistic Models for Continuous Ontogenetic Transition Processes
title Probabilistic Models for Continuous Ontogenetic Transition Processes
title_full Probabilistic Models for Continuous Ontogenetic Transition Processes
title_fullStr Probabilistic Models for Continuous Ontogenetic Transition Processes
title_full_unstemmed Probabilistic Models for Continuous Ontogenetic Transition Processes
title_short Probabilistic Models for Continuous Ontogenetic Transition Processes
title_sort probabilistic models for continuous ontogenetic transition processes
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2577064/
https://www.ncbi.nlm.nih.gov/pubmed/18997864
http://dx.doi.org/10.1371/journal.pone.0003677
work_keys_str_mv AT kuparinenanna probabilisticmodelsforcontinuousontogenetictransitionprocesses
AT ohararobertb probabilisticmodelsforcontinuousontogenetictransitionprocesses
AT merilajuha probabilisticmodelsforcontinuousontogenetictransitionprocesses