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Probabilistic Models for Continuous Ontogenetic Transition Processes
BACKGROUND: Probabilistic reaction norms (PRNs) are an extension of the concept of reaction norms, developed to account for stochasticity in ontogenetic transitions. However, logistic regression based PRNs are restricted to discrete time intervals, whereas previously proposed models for continuous t...
Autores principales: | , , |
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Formato: | Texto |
Lenguaje: | English |
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Public Library of Science
2008
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2577064/ https://www.ncbi.nlm.nih.gov/pubmed/18997864 http://dx.doi.org/10.1371/journal.pone.0003677 |
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author | Kuparinen, Anna O'Hara, Robert B. Merilä, Juha |
author_facet | Kuparinen, Anna O'Hara, Robert B. Merilä, Juha |
author_sort | Kuparinen, Anna |
collection | PubMed |
description | BACKGROUND: Probabilistic reaction norms (PRNs) are an extension of the concept of reaction norms, developed to account for stochasticity in ontogenetic transitions. However, logistic regression based PRNs are restricted to discrete time intervals, whereas previously proposed models for continuous transitions are demanding in terms of modelling effort and data needed. METHODOLOGY/PRINCIPAL FINDINGS: Here we introduce two alternative approaches for the probabilistic modelling of continuous ontogenetic transitions. The models are simplified in their description of forces underlying transitions, thus being empirical rather than mechanistic by their nature, but therefore applicable to situations where data and prior knowledge of transitions are limited. The models provide continuous time description of the transition pattern, insights into how it is affected by covariates, at the same time allowing for fine scale transition probability predictions. Performance of the models is demonstrated using empirical data on metamorphosis in common frogs (Rana temporaria) reared in a common garden experiment. CONCLUSIONS/SIGNIFICANCE: As being user-friendly and methodologically easily accessible, the models introduced in this study aid the concept of probabilistic reaction norms becoming as general and applicable tool in the studies of life-history variation as the deterministic reaction norms are today. |
format | Text |
id | pubmed-2577064 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-25770642008-11-10 Probabilistic Models for Continuous Ontogenetic Transition Processes Kuparinen, Anna O'Hara, Robert B. Merilä, Juha PLoS One Research Article BACKGROUND: Probabilistic reaction norms (PRNs) are an extension of the concept of reaction norms, developed to account for stochasticity in ontogenetic transitions. However, logistic regression based PRNs are restricted to discrete time intervals, whereas previously proposed models for continuous transitions are demanding in terms of modelling effort and data needed. METHODOLOGY/PRINCIPAL FINDINGS: Here we introduce two alternative approaches for the probabilistic modelling of continuous ontogenetic transitions. The models are simplified in their description of forces underlying transitions, thus being empirical rather than mechanistic by their nature, but therefore applicable to situations where data and prior knowledge of transitions are limited. The models provide continuous time description of the transition pattern, insights into how it is affected by covariates, at the same time allowing for fine scale transition probability predictions. Performance of the models is demonstrated using empirical data on metamorphosis in common frogs (Rana temporaria) reared in a common garden experiment. CONCLUSIONS/SIGNIFICANCE: As being user-friendly and methodologically easily accessible, the models introduced in this study aid the concept of probabilistic reaction norms becoming as general and applicable tool in the studies of life-history variation as the deterministic reaction norms are today. Public Library of Science 2008-11-10 /pmc/articles/PMC2577064/ /pubmed/18997864 http://dx.doi.org/10.1371/journal.pone.0003677 Text en Kuparinen et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Kuparinen, Anna O'Hara, Robert B. Merilä, Juha Probabilistic Models for Continuous Ontogenetic Transition Processes |
title | Probabilistic Models for Continuous Ontogenetic Transition Processes |
title_full | Probabilistic Models for Continuous Ontogenetic Transition Processes |
title_fullStr | Probabilistic Models for Continuous Ontogenetic Transition Processes |
title_full_unstemmed | Probabilistic Models for Continuous Ontogenetic Transition Processes |
title_short | Probabilistic Models for Continuous Ontogenetic Transition Processes |
title_sort | probabilistic models for continuous ontogenetic transition processes |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2577064/ https://www.ncbi.nlm.nih.gov/pubmed/18997864 http://dx.doi.org/10.1371/journal.pone.0003677 |
work_keys_str_mv | AT kuparinenanna probabilisticmodelsforcontinuousontogenetictransitionprocesses AT ohararobertb probabilisticmodelsforcontinuousontogenetictransitionprocesses AT merilajuha probabilisticmodelsforcontinuousontogenetictransitionprocesses |