Cargando…
From protein interactions to functional annotation: graph alignment in Herpes
BACKGROUND: Sequence alignment is a prolific basis of functional annotation, but remains a challenging problem in the 'twilight zone' of high sequence divergence or short gene length. Here we demonstrate how information on gene interactions can help to resolve ambiguous sequence alignments...
Autores principales: | Kolář, Michal, Lässig, Michael, Berg, Johannes |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2008
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2607256/ https://www.ncbi.nlm.nih.gov/pubmed/18957106 http://dx.doi.org/10.1186/1752-0509-2-90 |
Ejemplares similares
-
GraphAlignment: Bayesian pairwise alignment of biological networks
por: Kolář, Michal, et al.
Publicado: (2012) -
Structure and evolution of protein interaction networks: a statistical model for link dynamics and gene duplications
por: Berg, Johannes, et al.
Publicado: (2004) -
Graph embeddings on gene ontology annotations for protein–protein interaction prediction
por: Zhong, Xiaoshi, et al.
Publicado: (2020) -
Global alignment of protein–protein interaction networks by graph matching methods
por: Zaslavskiy, Mikhail, et al.
Publicado: (2009) -
Alignment-Annotator web server: rendering and annotating sequence alignments
por: Gille, Christoph, et al.
Publicado: (2014)