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Normalization of Voltage-Sensitive Dye Signal with Functional Activity Measures
In general, signal amplitude in optical imaging is normalized using the well-established ΔF/F method, where functional activity is divided by the total fluorescent light flux. This measure is used both directly, as a measure of population activity, and indirectly, to quantify spatial and spatiotempo...
Autores principales: | , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2008
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2612132/ https://www.ncbi.nlm.nih.gov/pubmed/19116673 http://dx.doi.org/10.1371/journal.pone.0004041 |
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author | Takagaki, Kentaroh Lippert, Michael Thomas Dann, Benjamin Wanger, Tim Ohl, Frank W. |
author_facet | Takagaki, Kentaroh Lippert, Michael Thomas Dann, Benjamin Wanger, Tim Ohl, Frank W. |
author_sort | Takagaki, Kentaroh |
collection | PubMed |
description | In general, signal amplitude in optical imaging is normalized using the well-established ΔF/F method, where functional activity is divided by the total fluorescent light flux. This measure is used both directly, as a measure of population activity, and indirectly, to quantify spatial and spatiotemporal activity patterns. Despite its ubiquitous use, the stability and accuracy of this measure has not been validated for voltage-sensitive dye imaging of mammalian neocortex in vivo. In this report, we find that this normalization can introduce dynamic biases. In particular, the ΔF/F is influenced by dye staining quality, and the ratio is also unstable over the course of experiments. As methods to record and analyze optical imaging signals become more precise, such biases can have an increasingly pernicious impact on the accuracy of findings, especially in the comparison of cytoarchitechtonic areas, in area-of-activation measurements, and in plasticity or developmental experiments. These dynamic biases of the ΔF/F method may, to an extent, be mitigated by a novel method of normalization, ΔF/ΔF(epileptiform). This normalization uses as a reference the measured activity of epileptiform spikes elicited by global disinhibition with bicuculline methiodide. Since this normalization is based on a functional measure, i.e. the signal amplitude of “hypersynchronized” bursts of activity in the cortical network, it is less influenced by staining of non-functional elements. We demonstrate that such a functional measure can better represent the amplitude of population mass action, and discuss alternative functional normalizations based on the amplitude of synchronized spontaneous sleep-like activity. These findings demonstrate that the traditional ΔF/F normalization of voltage-sensitive dye signals can introduce pernicious inaccuracies in the quantification of neural population activity. They further suggest that normalization-independent metrics such as waveform propagation patterns, oscillations in single detectors, and phase relationships between detector pairs may better capture the biological information which is obtained by high-sensitivity imaging. |
format | Text |
id | pubmed-2612132 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-26121322008-12-31 Normalization of Voltage-Sensitive Dye Signal with Functional Activity Measures Takagaki, Kentaroh Lippert, Michael Thomas Dann, Benjamin Wanger, Tim Ohl, Frank W. PLoS One Research Article In general, signal amplitude in optical imaging is normalized using the well-established ΔF/F method, where functional activity is divided by the total fluorescent light flux. This measure is used both directly, as a measure of population activity, and indirectly, to quantify spatial and spatiotemporal activity patterns. Despite its ubiquitous use, the stability and accuracy of this measure has not been validated for voltage-sensitive dye imaging of mammalian neocortex in vivo. In this report, we find that this normalization can introduce dynamic biases. In particular, the ΔF/F is influenced by dye staining quality, and the ratio is also unstable over the course of experiments. As methods to record and analyze optical imaging signals become more precise, such biases can have an increasingly pernicious impact on the accuracy of findings, especially in the comparison of cytoarchitechtonic areas, in area-of-activation measurements, and in plasticity or developmental experiments. These dynamic biases of the ΔF/F method may, to an extent, be mitigated by a novel method of normalization, ΔF/ΔF(epileptiform). This normalization uses as a reference the measured activity of epileptiform spikes elicited by global disinhibition with bicuculline methiodide. Since this normalization is based on a functional measure, i.e. the signal amplitude of “hypersynchronized” bursts of activity in the cortical network, it is less influenced by staining of non-functional elements. We demonstrate that such a functional measure can better represent the amplitude of population mass action, and discuss alternative functional normalizations based on the amplitude of synchronized spontaneous sleep-like activity. These findings demonstrate that the traditional ΔF/F normalization of voltage-sensitive dye signals can introduce pernicious inaccuracies in the quantification of neural population activity. They further suggest that normalization-independent metrics such as waveform propagation patterns, oscillations in single detectors, and phase relationships between detector pairs may better capture the biological information which is obtained by high-sensitivity imaging. Public Library of Science 2008-12-24 /pmc/articles/PMC2612132/ /pubmed/19116673 http://dx.doi.org/10.1371/journal.pone.0004041 Text en Takagaki et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Takagaki, Kentaroh Lippert, Michael Thomas Dann, Benjamin Wanger, Tim Ohl, Frank W. Normalization of Voltage-Sensitive Dye Signal with Functional Activity Measures |
title | Normalization of Voltage-Sensitive Dye Signal with Functional
Activity Measures |
title_full | Normalization of Voltage-Sensitive Dye Signal with Functional
Activity Measures |
title_fullStr | Normalization of Voltage-Sensitive Dye Signal with Functional
Activity Measures |
title_full_unstemmed | Normalization of Voltage-Sensitive Dye Signal with Functional
Activity Measures |
title_short | Normalization of Voltage-Sensitive Dye Signal with Functional
Activity Measures |
title_sort | normalization of voltage-sensitive dye signal with functional
activity measures |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2612132/ https://www.ncbi.nlm.nih.gov/pubmed/19116673 http://dx.doi.org/10.1371/journal.pone.0004041 |
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