Cargando…

TraR, a Homolog of a RNAP Secondary Channel Interactor, Modulates Transcription

Recent structural and biochemical studies have identified a novel control mechanism of gene expression mediated through the secondary channel of RNA Polymerase (RNAP) during transcription initiation. Specifically, the small nucleotide ppGpp, along with DksA, a RNAP secondary channel interacting fact...

Descripción completa

Detalles Bibliográficos
Autores principales:	Blankschien, Matthew D., Potrykus, Katarzyna, Grace, Elicia, Choudhary, Abha, Vinella, Daniel, Cashel, Michael, Herman, Christophe
Formato:	Texto
Lenguaje:	English
Publicado:	Public Library of Science 2009
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2613031/ https://www.ncbi.nlm.nih.gov/pubmed/19148274 http://dx.doi.org/10.1371/journal.pgen.1000345

Ejemplares similares

Theoretical Study of Molecular Determinants Involved in Signal Binding to the TraR Protein of Agrobacterium tumefaciens
por: Goh, Wai-Kean, et al.
Publicado: (2005)

E. coli TraR allosterically regulates transcription initiation by altering RNA polymerase conformation
por: Chen, James, et al.
Publicado: (2019)

Homologs of the Escherichia coli F Element Protein TraR, Including Phage Lambda Orf73, Directly Reprogram Host Transcription
por: Gopalkrishnan, Saumya, et al.
Publicado: (2022)

Editorial: (p)ppGpp and Its Homologs: Enzymatic and Mechanistic Diversity Among the Microbes
por: Potrykus, Katarzyna, et al.
Publicado: (2021)

Quorum‐dependent transfer of the opine‐catabolic plasmid pAoF64/95 is regulated by a novel mechanism involving inhibition of the TraR antiactivator TraM
por: Wetzel, Margaret E., et al.
Publicado: (2018)

Regulation of Eukaryotic RNAPs Activities by Phosphorylation
por: González-Jiménez, Araceli, et al.
Publicado: (2021)

Methylobacterium extorquens RSH Enzyme Synthesizes (p)ppGpp and pppApp in vitro and in vivo, and Leads to Discovery of pppApp Synthesis in Escherichia coli
por: Sobala, Michał, et al.
Publicado: (2019)

Mutational analysis of Escherichia coli GreA protein reveals new functional activity independent of antipause and lethal when overexpressed
por: Fernández-Coll, Llorenç, et al.
Publicado: (2020)

Differential regulation by ppGpp versus pppGpp in Escherichia coli
por: Mechold, Undine, et al.
Publicado: (2013)

Genome-wide mapping of the distribution of CarD, RNAP σ(A), and RNAP β on the Mycobacterium smegmatis chromosome using chromatin immunoprecipitation sequencing
por: Landick, Robert, et al.
Publicado: (2014)

Imprecise transcription termination within Escherichia coli greA leader gives rise to an array of short transcripts, GraL
por: Potrykus, Katarzyna, et al.
Publicado: (2010)

VirB8 homolog TraE from plasmid pKM101 forms a hexameric ring structure and interacts with the VirB6 homolog TraD
por: Casu, Bastien, et al.
Publicado: (2018)

ChIP-exo interrogation of Crp, DNA, and RNAP holoenzyme interactions
por: Latif, Haythem, et al.
Publicado: (2018)

Virus–Host Interaction Gets Curiouser and Curiouser. PART I: Phage P1vir Enhanced Development in an E. coli DksA-Deficient Cell
por: Cech, Grzegorz M., et al.
Publicado: (2021)

Rad5 and Its Human Homologs, HLTF and SHPRH, Are Novel Interactors of Mismatch Repair
por: Miller, Anna K., et al.
Publicado: (2022)

RNAP II CTD tyrosine 1 performs diverse functions in vertebrate cells
por: Hsin, Jing-Ping, et al.
Publicado: (2014)

Yeast mitochondrial RNAP conformational changes are regulated by interactions with the mitochondrial transcription factor
por: Drakulic, Srdja, et al.
Publicado: (2014)

RNAP-II Molecules Participate in the Anchoring of the ORC to rDNA Replication Origins
por: Mayan, Maria D.
Publicado: (2013)

Primary microRNA processing is functionally coupled to RNAP II transcription in vitro
por: Yin, Shanye, et al.
Publicado: (2015)

Dynamics of promoter bivalency and RNAP II pausing in mouse stem and differentiated cells
por: Mantsoki, Anna, et al.
Publicado: (2018)

Evolutionary Invariant of the Structure of DNA Double Helix in RNAP II Core Promoters
por: Melikhova, Anastasia V., et al.
Publicado: (2022)

Estimates of Rel(Seq), Mesh1, and SAH(Mex) Hydrolysis of (p)ppGpp and (p)ppApp by Thin Layer Chromatography and NADP/NADH Coupled Assays
por: Potrykus, Katarzyna, et al.
Publicado: (2020)

The Non-Canonical CTD of RNAP-II Is Essential for Productive RNA Synthesis in Trypanosoma brucei
por: Das, Anish, et al.
Publicado: (2009)

The transcription factor network of E. coli steers global responses to shifts in RNAP concentration
por: L.B. Almeida, Bilena, et al.
Publicado: (2022)

A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II
por: Liu, Yanli, et al.
Publicado: (2022)

Mitochondrial Metabolism in the Spotlight: Maintaining Balanced RNAP III Activity Ensures Cellular Homeostasis
por: Szatkowska, Roza, et al.
Publicado: (2023)

Insights into Transcriptional Repression of the Homologous Toxin-Antitoxin Cassettes yefM-yoeB and axe-txe
por: Kędzierska, Barbara, et al.
Publicado: (2020)

Le tra{circ}itre
por: Gorz, André
Publicado: (1958)

Combined SPT and FCS methods reveal a mechanism of RNAP II oversampling in cell nuclei
por: Fournier, Marie, et al.
Publicado: (2023)

Towards T7 RNA polymerase (T7RNAP)-based expression system in yeast: challenges and opportunities
por: Sáez Moreno, David, et al.
Publicado: (2023)

The splicing regulators Tra and Tra2 are unusually potent activators of pre-mRNA splicing
por: Sciabica, Kathryn S., et al.
Publicado: (2006)

The TRAR gene classifier to predict response to neoadjuvant therapy in HER2‐positive and ER‐positive breast cancer patients: an explorative analysis from the NeoSphere trial
por: Triulzi, Tiziana, et al.
Publicado: (2021)

Female Sex Determination Factors in Ceratitis capitata: Molecular and Structural Basis of TRA and TRA2 Recognition
por: Perrotta, Maryanna Martina, et al.
Publicado: (2023)

Identification of tri-phosphatase activity in the biogenesis of retroviral microRNAs and RNAP III-generated shRNAs
por: Burke, James M., et al.
Publicado: (2014)

Pseudomonas aeruginosa SutA wedges RNAP lobe domain open to facilitate promoter DNA unwinding
por: He, Dingwei, et al.
Publicado: (2022)

Synthetic evolution of herbicide resistance using a T7 RNAP–based random DNA base editor
por: Butt, Haroon, et al.
Publicado: (2022)

Analysis of MreB interactors in Chlamydia reveals a RodZ homolog but fails to detect an interaction with MraY
por: Ouellette, Scot P., et al.
Publicado: (2014)

Calibration of TRA468; TOF transformer
por: Carter, C
Publicado: (2001)

jTraML: An Open Source Java API for TraML, the PSI Standard for Sharing SRM Transitions
por: Helsens, Kenny, et al.
Publicado: (2011)

Regulation of cytohesins by their interactors in the nervous system
por: Zhai, Yuqi, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_klnc7eq557les4bg2qfk6f15tq