CellProfiler Analyst: data exploration and analysis software for complex image-based screens

BACKGROUND: Image-based screens can produce hundreds of measured features for each of hundreds of millions of individual cells in a single experiment. RESULTS: Here, we describe CellProfiler Analyst, open-source software for the interactive exploration and analysis of multidimensional data, particul...

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Detalles Bibliográficos
Autores principales: Jones, Thouis R, Kang, In Han, Wheeler, Douglas B, Lindquist, Robert A, Papallo, Adam, Sabatini, David M, Golland, Polina, Carpenter, Anne E
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2008
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2614436/
https://www.ncbi.nlm.nih.gov/pubmed/19014601
http://dx.doi.org/10.1186/1471-2105-9-482
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author Jones, Thouis R
Kang, In Han
Wheeler, Douglas B
Lindquist, Robert A
Papallo, Adam
Sabatini, David M
Golland, Polina
Carpenter, Anne E
author_facet Jones, Thouis R
Kang, In Han
Wheeler, Douglas B
Lindquist, Robert A
Papallo, Adam
Sabatini, David M
Golland, Polina
Carpenter, Anne E
author_sort Jones, Thouis R
collection PubMed
description BACKGROUND: Image-based screens can produce hundreds of measured features for each of hundreds of millions of individual cells in a single experiment. RESULTS: Here, we describe CellProfiler Analyst, open-source software for the interactive exploration and analysis of multidimensional data, particularly data from high-throughput, image-based experiments. CONCLUSION: The system enables interactive data exploration for image-based screens and automated scoring of complex phenotypes that require combinations of multiple measured features per cell.
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spelling pubmed-26144362009-01-07 CellProfiler Analyst: data exploration and analysis software for complex image-based screens Jones, Thouis R Kang, In Han Wheeler, Douglas B Lindquist, Robert A Papallo, Adam Sabatini, David M Golland, Polina Carpenter, Anne E BMC Bioinformatics Software BACKGROUND: Image-based screens can produce hundreds of measured features for each of hundreds of millions of individual cells in a single experiment. RESULTS: Here, we describe CellProfiler Analyst, open-source software for the interactive exploration and analysis of multidimensional data, particularly data from high-throughput, image-based experiments. CONCLUSION: The system enables interactive data exploration for image-based screens and automated scoring of complex phenotypes that require combinations of multiple measured features per cell. BioMed Central 2008-11-15 /pmc/articles/PMC2614436/ /pubmed/19014601 http://dx.doi.org/10.1186/1471-2105-9-482 Text en Copyright © 2008 Jones et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Software
Jones, Thouis R
Kang, In Han
Wheeler, Douglas B
Lindquist, Robert A
Papallo, Adam
Sabatini, David M
Golland, Polina
Carpenter, Anne E
CellProfiler Analyst: data exploration and analysis software for complex image-based screens
title CellProfiler Analyst: data exploration and analysis software for complex image-based screens
title_full CellProfiler Analyst: data exploration and analysis software for complex image-based screens
title_fullStr CellProfiler Analyst: data exploration and analysis software for complex image-based screens
title_full_unstemmed CellProfiler Analyst: data exploration and analysis software for complex image-based screens
title_short CellProfiler Analyst: data exploration and analysis software for complex image-based screens
title_sort cellprofiler analyst: data exploration and analysis software for complex image-based screens
topic Software
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2614436/
https://www.ncbi.nlm.nih.gov/pubmed/19014601
http://dx.doi.org/10.1186/1471-2105-9-482
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