Cargando…
Fast algorithms for computing sequence distances by exhaustive substring composition
The increasing throughput of sequencing raises growing needs for methods of sequence analysis and comparison on a genomic scale, notably, in connection with phylogenetic tree reconstruction. Such needs are hardly fulfilled by the more traditional measures of sequence similarity and distance, like st...
Autores principales: | Apostolico, Alberto, Denas, Olgert |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2008
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2615014/ https://www.ncbi.nlm.nih.gov/pubmed/18957094 http://dx.doi.org/10.1186/1748-7188-3-13 |
Ejemplares similares
-
A New Algorithm for Fast All-Against-All Substring Matching
por: Barsky, Marina, et al.
Publicado: (2006) -
Fast and compact matching statistics analytics
por: Cunial, Fabio, et al.
Publicado: (2022) -
Simultaneous identification of long similar substrings in large sets of sequences
por: Kleffe, Jürgen, et al.
Publicado: (2007) -
Efficient privacy-preserving variable-length substring match for genome sequence
por: Nakagawa, Yoshiki, et al.
Publicado: (2022) -
Mining Unique-m Substrings from Genomes
por: Ye, Kai, et al.
Publicado: (2010)