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Mouse period 2 mRNA circadian oscillation is modulated by PTB–mediated rhythmic mRNA degradation

Circadian mRNA oscillations are the main feature of core clock genes. Among them, period 2 is a key component in negative-feedback regulation, showing robust diurnal oscillations. Moreover, period 2 has been found to have a physiological role in the cell cycle or the tumor suppression. The present s...

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Autores principales: Woo, Kyung-Chul, Kim, Tae-Don, Lee, Kyung-Ha, Kim, Do-Yeon, Kim, Wanil, Lee, Kyung-Yeol, Kim, Kyong-Tai
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
RNA
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2615616/
https://www.ncbi.nlm.nih.gov/pubmed/19010962
http://dx.doi.org/10.1093/nar/gkn893
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author Woo, Kyung-Chul
Kim, Tae-Don
Lee, Kyung-Ha
Kim, Do-Yeon
Kim, Wanil
Lee, Kyung-Yeol
Kim, Kyong-Tai
author_facet Woo, Kyung-Chul
Kim, Tae-Don
Lee, Kyung-Ha
Kim, Do-Yeon
Kim, Wanil
Lee, Kyung-Yeol
Kim, Kyong-Tai
author_sort Woo, Kyung-Chul
collection PubMed
description Circadian mRNA oscillations are the main feature of core clock genes. Among them, period 2 is a key component in negative-feedback regulation, showing robust diurnal oscillations. Moreover, period 2 has been found to have a physiological role in the cell cycle or the tumor suppression. The present study reports that 3′-untranslated region (UTR)-dependent mRNA decay is involved in the regulation of circadian oscillation of period 2 mRNA. Within the mper2 3′UTR, both the CU-rich region and polypyrimidine tract-binding protein (PTB) are more responsible for mRNA stability and degradation kinetics than are other factors. Depletion of PTB with RNAi results in mper2 mRNA stabilization. During the circadian oscillations of mper2, cytoplasmic PTB showed a reciprocal expression profile compared with mper2 mRNA and its peak amplitude was increased when PTB was depleted. This report on the regulation of mper2 proposes that post-transcriptional mRNA decay mediated by PTB is a fine-tuned regulatory mechanism that includes dampening-down effects during circadian mRNA oscillations.
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spelling pubmed-26156162009-03-30 Mouse period 2 mRNA circadian oscillation is modulated by PTB–mediated rhythmic mRNA degradation Woo, Kyung-Chul Kim, Tae-Don Lee, Kyung-Ha Kim, Do-Yeon Kim, Wanil Lee, Kyung-Yeol Kim, Kyong-Tai Nucleic Acids Res RNA Circadian mRNA oscillations are the main feature of core clock genes. Among them, period 2 is a key component in negative-feedback regulation, showing robust diurnal oscillations. Moreover, period 2 has been found to have a physiological role in the cell cycle or the tumor suppression. The present study reports that 3′-untranslated region (UTR)-dependent mRNA decay is involved in the regulation of circadian oscillation of period 2 mRNA. Within the mper2 3′UTR, both the CU-rich region and polypyrimidine tract-binding protein (PTB) are more responsible for mRNA stability and degradation kinetics than are other factors. Depletion of PTB with RNAi results in mper2 mRNA stabilization. During the circadian oscillations of mper2, cytoplasmic PTB showed a reciprocal expression profile compared with mper2 mRNA and its peak amplitude was increased when PTB was depleted. This report on the regulation of mper2 proposes that post-transcriptional mRNA decay mediated by PTB is a fine-tuned regulatory mechanism that includes dampening-down effects during circadian mRNA oscillations. Oxford University Press 2009-01 2008-11-14 /pmc/articles/PMC2615616/ /pubmed/19010962 http://dx.doi.org/10.1093/nar/gkn893 Text en © 2008 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle RNA
Woo, Kyung-Chul
Kim, Tae-Don
Lee, Kyung-Ha
Kim, Do-Yeon
Kim, Wanil
Lee, Kyung-Yeol
Kim, Kyong-Tai
Mouse period 2 mRNA circadian oscillation is modulated by PTB–mediated rhythmic mRNA degradation
title Mouse period 2 mRNA circadian oscillation is modulated by PTB–mediated rhythmic mRNA degradation
title_full Mouse period 2 mRNA circadian oscillation is modulated by PTB–mediated rhythmic mRNA degradation
title_fullStr Mouse period 2 mRNA circadian oscillation is modulated by PTB–mediated rhythmic mRNA degradation
title_full_unstemmed Mouse period 2 mRNA circadian oscillation is modulated by PTB–mediated rhythmic mRNA degradation
title_short Mouse period 2 mRNA circadian oscillation is modulated by PTB–mediated rhythmic mRNA degradation
title_sort mouse period 2 mrna circadian oscillation is modulated by ptb–mediated rhythmic mrna degradation
topic RNA
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2615616/
https://www.ncbi.nlm.nih.gov/pubmed/19010962
http://dx.doi.org/10.1093/nar/gkn893
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