Cargando…

Genome Analysis of the Anaerobic Thermohalophilic Bacterium Halothermothrix orenii

Halothermothirx orenii is a strictly anaerobic thermohalophilic bacterium isolated from sediment of a Tunisian salt lake. It belongs to the order Halanaerobiales in the phylum Firmicutes. The complete sequence revealed that the genome consists of one circular chromosome of 2578146 bps encoding 2451...

Descripción completa

Detalles Bibliográficos
Autores principales: Mavromatis, Konstantinos, Ivanova, Natalia, Anderson, Iain, Lykidis, Athanasios, Hooper, Sean D., Sun, Hui, Kunin, Victor, Lapidus, Alla, Hugenholtz, Philip, Patel, Bharat, Kyrpides, Nikos C.
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2626281/
https://www.ncbi.nlm.nih.gov/pubmed/19145256
http://dx.doi.org/10.1371/journal.pone.0004192
_version_ 1782163448065425408
author Mavromatis, Konstantinos
Ivanova, Natalia
Anderson, Iain
Lykidis, Athanasios
Hooper, Sean D.
Sun, Hui
Kunin, Victor
Lapidus, Alla
Hugenholtz, Philip
Patel, Bharat
Kyrpides, Nikos C.
author_facet Mavromatis, Konstantinos
Ivanova, Natalia
Anderson, Iain
Lykidis, Athanasios
Hooper, Sean D.
Sun, Hui
Kunin, Victor
Lapidus, Alla
Hugenholtz, Philip
Patel, Bharat
Kyrpides, Nikos C.
author_sort Mavromatis, Konstantinos
collection PubMed
description Halothermothirx orenii is a strictly anaerobic thermohalophilic bacterium isolated from sediment of a Tunisian salt lake. It belongs to the order Halanaerobiales in the phylum Firmicutes. The complete sequence revealed that the genome consists of one circular chromosome of 2578146 bps encoding 2451 predicted genes. This is the first genome sequence of an organism belonging to the Haloanaerobiales. Features of both Gram positive and Gram negative bacteria were identified with the presence of both a sporulating mechanism typical of Firmicutes and a characteristic Gram negative lipopolysaccharide being the most prominent. Protein sequence analyses and metabolic reconstruction reveal a unique combination of strategies for thermophilic and halophilic adaptation. H. orenii can serve as a model organism for the study of the evolution of the Gram negative phenotype as well as the adaptation under thermohalophilic conditions and the development of biotechnological applications under conditions that require high temperatures and high salt concentrations.
format Text
id pubmed-2626281
institution National Center for Biotechnology Information
language English
publishDate 2009
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-26262812009-01-15 Genome Analysis of the Anaerobic Thermohalophilic Bacterium Halothermothrix orenii Mavromatis, Konstantinos Ivanova, Natalia Anderson, Iain Lykidis, Athanasios Hooper, Sean D. Sun, Hui Kunin, Victor Lapidus, Alla Hugenholtz, Philip Patel, Bharat Kyrpides, Nikos C. PLoS One Research Article Halothermothirx orenii is a strictly anaerobic thermohalophilic bacterium isolated from sediment of a Tunisian salt lake. It belongs to the order Halanaerobiales in the phylum Firmicutes. The complete sequence revealed that the genome consists of one circular chromosome of 2578146 bps encoding 2451 predicted genes. This is the first genome sequence of an organism belonging to the Haloanaerobiales. Features of both Gram positive and Gram negative bacteria were identified with the presence of both a sporulating mechanism typical of Firmicutes and a characteristic Gram negative lipopolysaccharide being the most prominent. Protein sequence analyses and metabolic reconstruction reveal a unique combination of strategies for thermophilic and halophilic adaptation. H. orenii can serve as a model organism for the study of the evolution of the Gram negative phenotype as well as the adaptation under thermohalophilic conditions and the development of biotechnological applications under conditions that require high temperatures and high salt concentrations. Public Library of Science 2009-01-15 /pmc/articles/PMC2626281/ /pubmed/19145256 http://dx.doi.org/10.1371/journal.pone.0004192 Text en Mavromatis et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Mavromatis, Konstantinos
Ivanova, Natalia
Anderson, Iain
Lykidis, Athanasios
Hooper, Sean D.
Sun, Hui
Kunin, Victor
Lapidus, Alla
Hugenholtz, Philip
Patel, Bharat
Kyrpides, Nikos C.
Genome Analysis of the Anaerobic Thermohalophilic Bacterium Halothermothrix orenii
title Genome Analysis of the Anaerobic Thermohalophilic Bacterium Halothermothrix orenii
title_full Genome Analysis of the Anaerobic Thermohalophilic Bacterium Halothermothrix orenii
title_fullStr Genome Analysis of the Anaerobic Thermohalophilic Bacterium Halothermothrix orenii
title_full_unstemmed Genome Analysis of the Anaerobic Thermohalophilic Bacterium Halothermothrix orenii
title_short Genome Analysis of the Anaerobic Thermohalophilic Bacterium Halothermothrix orenii
title_sort genome analysis of the anaerobic thermohalophilic bacterium halothermothrix orenii
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2626281/
https://www.ncbi.nlm.nih.gov/pubmed/19145256
http://dx.doi.org/10.1371/journal.pone.0004192
work_keys_str_mv AT mavromatiskonstantinos genomeanalysisoftheanaerobicthermohalophilicbacteriumhalothermothrixorenii
AT ivanovanatalia genomeanalysisoftheanaerobicthermohalophilicbacteriumhalothermothrixorenii
AT andersoniain genomeanalysisoftheanaerobicthermohalophilicbacteriumhalothermothrixorenii
AT lykidisathanasios genomeanalysisoftheanaerobicthermohalophilicbacteriumhalothermothrixorenii
AT hooperseand genomeanalysisoftheanaerobicthermohalophilicbacteriumhalothermothrixorenii
AT sunhui genomeanalysisoftheanaerobicthermohalophilicbacteriumhalothermothrixorenii
AT kuninvictor genomeanalysisoftheanaerobicthermohalophilicbacteriumhalothermothrixorenii
AT lapidusalla genomeanalysisoftheanaerobicthermohalophilicbacteriumhalothermothrixorenii
AT hugenholtzphilip genomeanalysisoftheanaerobicthermohalophilicbacteriumhalothermothrixorenii
AT patelbharat genomeanalysisoftheanaerobicthermohalophilicbacteriumhalothermothrixorenii
AT kyrpidesnikosc genomeanalysisoftheanaerobicthermohalophilicbacteriumhalothermothrixorenii