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A 7 µm mini-beam improves diffraction data from small or imperfect crystals of macromolecules
A simple apparatus for achieving beam sizes in the range 5–10 µm on a synchrotron beamline was implemented in combination with a small 125 × 25 µm focus. The resulting beam had sufficient flux for crystallographic data collection from samples smaller than 10 × 10 × 10 µm. Sample data were collected...
Autores principales: | , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2008
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2631116/ https://www.ncbi.nlm.nih.gov/pubmed/18391409 http://dx.doi.org/10.1107/S0907444908001741 |
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author | Sanishvili, Ruslan Nagarajan, Venugopalan Yoder, Derek Becker, Michael Xu, Shenglan Corcoran, Stephen Akey, David L. Smith, Janet L. Fischetti, Robert F. |
author_facet | Sanishvili, Ruslan Nagarajan, Venugopalan Yoder, Derek Becker, Michael Xu, Shenglan Corcoran, Stephen Akey, David L. Smith, Janet L. Fischetti, Robert F. |
author_sort | Sanishvili, Ruslan |
collection | PubMed |
description | A simple apparatus for achieving beam sizes in the range 5–10 µm on a synchrotron beamline was implemented in combination with a small 125 × 25 µm focus. The resulting beam had sufficient flux for crystallographic data collection from samples smaller than 10 × 10 × 10 µm. Sample data were collected representing three different scenarios: (i) a complete 2.0 Å data set from a single strongly diffracting microcrystal, (ii) a complete and redundant 1.94 Å data set obtained by merging data from six microcrystals and (iii) a complete 2.24 Å data set from a needle-shaped crystal with less than 12 × 10 µm cross-section and average diffracting power. The resulting data were of high quality, leading to well refined structures with good electron-density maps. The signal-to-noise ratios for data collected from small crystals with the mini-beam were significantly higher than for equivalent data collected from the same crystal with a 125 × 25 µm beam. Relative to this large beam, use of the mini-beam also resulted in lower refined crystal mosaicities. The mini-beam proved to be advantageous for inhomogeneous large crystals, where better ordered regions could be selected by the smaller beam. |
format | Text |
id | pubmed-2631116 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-26311162009-03-05 A 7 µm mini-beam improves diffraction data from small or imperfect crystals of macromolecules Sanishvili, Ruslan Nagarajan, Venugopalan Yoder, Derek Becker, Michael Xu, Shenglan Corcoran, Stephen Akey, David L. Smith, Janet L. Fischetti, Robert F. Acta Crystallogr D Biol Crystallogr Research Papers A simple apparatus for achieving beam sizes in the range 5–10 µm on a synchrotron beamline was implemented in combination with a small 125 × 25 µm focus. The resulting beam had sufficient flux for crystallographic data collection from samples smaller than 10 × 10 × 10 µm. Sample data were collected representing three different scenarios: (i) a complete 2.0 Å data set from a single strongly diffracting microcrystal, (ii) a complete and redundant 1.94 Å data set obtained by merging data from six microcrystals and (iii) a complete 2.24 Å data set from a needle-shaped crystal with less than 12 × 10 µm cross-section and average diffracting power. The resulting data were of high quality, leading to well refined structures with good electron-density maps. The signal-to-noise ratios for data collected from small crystals with the mini-beam were significantly higher than for equivalent data collected from the same crystal with a 125 × 25 µm beam. Relative to this large beam, use of the mini-beam also resulted in lower refined crystal mosaicities. The mini-beam proved to be advantageous for inhomogeneous large crystals, where better ordered regions could be selected by the smaller beam. International Union of Crystallography 2008-04-01 2008-03-19 /pmc/articles/PMC2631116/ /pubmed/18391409 http://dx.doi.org/10.1107/S0907444908001741 Text en © International Union of Crystallography 2008 |
spellingShingle | Research Papers Sanishvili, Ruslan Nagarajan, Venugopalan Yoder, Derek Becker, Michael Xu, Shenglan Corcoran, Stephen Akey, David L. Smith, Janet L. Fischetti, Robert F. A 7 µm mini-beam improves diffraction data from small or imperfect crystals of macromolecules |
title | A 7 µm mini-beam improves diffraction data from small or imperfect crystals of macromolecules |
title_full | A 7 µm mini-beam improves diffraction data from small or imperfect crystals of macromolecules |
title_fullStr | A 7 µm mini-beam improves diffraction data from small or imperfect crystals of macromolecules |
title_full_unstemmed | A 7 µm mini-beam improves diffraction data from small or imperfect crystals of macromolecules |
title_short | A 7 µm mini-beam improves diffraction data from small or imperfect crystals of macromolecules |
title_sort | 7 µm mini-beam improves diffraction data from small or imperfect crystals of macromolecules |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2631116/ https://www.ncbi.nlm.nih.gov/pubmed/18391409 http://dx.doi.org/10.1107/S0907444908001741 |
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