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Identification of JAK/STAT pathway regulators—Insights from RNAi screens
While many core JAK/STAT pathway components have been discovered in Drosophila via classical genetic approaches, the identification of pathway regulators has been more challenging. Recently two cell-based RNAi screens for JAK/STAT pathway regulators have been undertaken using libraries of double-str...
Autores principales: | , , |
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Formato: | Texto |
Lenguaje: | English |
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Academic Press
2008
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2631610/ https://www.ncbi.nlm.nih.gov/pubmed/18586112 http://dx.doi.org/10.1016/j.semcdb.2008.06.001 |
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author | Müller, Patrick Boutros, Michael Zeidler, Martin P. |
author_facet | Müller, Patrick Boutros, Michael Zeidler, Martin P. |
author_sort | Müller, Patrick |
collection | PubMed |
description | While many core JAK/STAT pathway components have been discovered in Drosophila via classical genetic approaches, the identification of pathway regulators has been more challenging. Recently two cell-based RNAi screens for JAK/STAT pathway regulators have been undertaken using libraries of double-stranded RNAs targeting a large proportion of the predicted Drosophila transcriptome. While both screens identified multiple regulators, only relatively few loci are common to both data sets. Here we compare the two screens and discuss these differences. Although many factors are likely to be contributory, differences in the assay design are of key importance. Low levels of stimulation favouring the identification of negative pathway regulators and high levels of stimulation favouring the identification of positively acting factors. Ultimately, the results from both screens are likely to be largely complementary and have identified a range of novel candidate regulators of JAK/STAT pathway activity as a starting point for new research directions in the future. |
format | Text |
id | pubmed-2631610 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | Academic Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-26316102009-01-30 Identification of JAK/STAT pathway regulators—Insights from RNAi screens Müller, Patrick Boutros, Michael Zeidler, Martin P. Semin Cell Dev Biol Review While many core JAK/STAT pathway components have been discovered in Drosophila via classical genetic approaches, the identification of pathway regulators has been more challenging. Recently two cell-based RNAi screens for JAK/STAT pathway regulators have been undertaken using libraries of double-stranded RNAs targeting a large proportion of the predicted Drosophila transcriptome. While both screens identified multiple regulators, only relatively few loci are common to both data sets. Here we compare the two screens and discuss these differences. Although many factors are likely to be contributory, differences in the assay design are of key importance. Low levels of stimulation favouring the identification of negative pathway regulators and high levels of stimulation favouring the identification of positively acting factors. Ultimately, the results from both screens are likely to be largely complementary and have identified a range of novel candidate regulators of JAK/STAT pathway activity as a starting point for new research directions in the future. Academic Press 2008-08 /pmc/articles/PMC2631610/ /pubmed/18586112 http://dx.doi.org/10.1016/j.semcdb.2008.06.001 Text en © 2008 Elsevier Ltd. https://creativecommons.org/licenses/by-nc-nd/3.0/ Open Access under CC BY-NC-ND 3.0 (https://creativecommons.org/licenses/by-nc-nd/3.0/) license |
spellingShingle | Review Müller, Patrick Boutros, Michael Zeidler, Martin P. Identification of JAK/STAT pathway regulators—Insights from RNAi screens |
title | Identification of JAK/STAT pathway regulators—Insights from RNAi screens |
title_full | Identification of JAK/STAT pathway regulators—Insights from RNAi screens |
title_fullStr | Identification of JAK/STAT pathway regulators—Insights from RNAi screens |
title_full_unstemmed | Identification of JAK/STAT pathway regulators—Insights from RNAi screens |
title_short | Identification of JAK/STAT pathway regulators—Insights from RNAi screens |
title_sort | identification of jak/stat pathway regulators—insights from rnai screens |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2631610/ https://www.ncbi.nlm.nih.gov/pubmed/18586112 http://dx.doi.org/10.1016/j.semcdb.2008.06.001 |
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