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Genetic linkage study of high-grade myopia in a Hutterite population from South Dakota

PURPOSE: Myopia is a common, complex disorder, and severe forms have implications for blindness due to increased risk of premature cataracts, glaucoma, retinal detachment, and macular degeneration. Autosomal dominant (AD) non-syndromic high-grade myopia has been mapped to chromosomes 18p11.31, 12q21...

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Autores principales: Nallasamy, Sudha, Paluru, Prasuna C., Devoto, Marcella, Wasserman, Nora F., Zhou, Jie, Young, Terri L.
Formato: Texto
Lenguaje:English
Publicado: Molecular Vision 2007
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2633468/
https://www.ncbi.nlm.nih.gov/pubmed/17327828
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author Nallasamy, Sudha
Paluru, Prasuna C.
Devoto, Marcella
Wasserman, Nora F.
Zhou, Jie
Young, Terri L.
author_facet Nallasamy, Sudha
Paluru, Prasuna C.
Devoto, Marcella
Wasserman, Nora F.
Zhou, Jie
Young, Terri L.
author_sort Nallasamy, Sudha
collection PubMed
description PURPOSE: Myopia is a common, complex disorder, and severe forms have implications for blindness due to increased risk of premature cataracts, glaucoma, retinal detachment, and macular degeneration. Autosomal dominant (AD) non-syndromic high-grade myopia has been mapped to chromosomes 18p11.31, 12q21-23, 17q21-23, 7q36, 2q37.1, 7p15.3, 15q12-13, 3q26, 4q12, 8p23, 4q22-q27, 1p36, and Xq23-q25. Here, we demonstrate evidence of linkage for AD non-syndromic high-grade myopia in a large Hutterite family to a locus on chromosome 10q21.1. METHODS: After clinical evaluation, genomic DNA was genotyped from 29 members of a Hutterite family from South Dakota (7 affected). The average refractive error of affected individuals was -7.04 diopters. Microsatellite markers were used to exclude linkage to the known AD nonsyndromic high-grade myopia loci as well as to syndromic high-grade myopia loci. A genome screen was then performed using 382 markers with an average inter-marker distance of 10 cM followed by fine-point mapping in all regions of the genome that gave positive LOD scores. SimWalk2 software was used for multipoint linkage based on AD and autosomal recessive (AR) models with a penetrance of 90% and a disease allele frequency of 0.001. RESULTS: A maximum multipoint LOD score of 3.22 was achieved under an AD model at microsatellite marker D10S1643. Fine point mapping and haplotype analysis defined a critical region of 2.67 cM on chromosome 10q21.1. Haplotype analysis demonstrated two distinct haplotypes segregating with high-grade myopia, indicative of two distinct mutations occurring in the same gene. CONCLUSIONS: We have identified a presumptive myopia locus for high-grade myopia based on linkage and haplotype analysis.
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spelling pubmed-26334682009-02-02 Genetic linkage study of high-grade myopia in a Hutterite population from South Dakota Nallasamy, Sudha Paluru, Prasuna C. Devoto, Marcella Wasserman, Nora F. Zhou, Jie Young, Terri L. Mol Vis Research Article PURPOSE: Myopia is a common, complex disorder, and severe forms have implications for blindness due to increased risk of premature cataracts, glaucoma, retinal detachment, and macular degeneration. Autosomal dominant (AD) non-syndromic high-grade myopia has been mapped to chromosomes 18p11.31, 12q21-23, 17q21-23, 7q36, 2q37.1, 7p15.3, 15q12-13, 3q26, 4q12, 8p23, 4q22-q27, 1p36, and Xq23-q25. Here, we demonstrate evidence of linkage for AD non-syndromic high-grade myopia in a large Hutterite family to a locus on chromosome 10q21.1. METHODS: After clinical evaluation, genomic DNA was genotyped from 29 members of a Hutterite family from South Dakota (7 affected). The average refractive error of affected individuals was -7.04 diopters. Microsatellite markers were used to exclude linkage to the known AD nonsyndromic high-grade myopia loci as well as to syndromic high-grade myopia loci. A genome screen was then performed using 382 markers with an average inter-marker distance of 10 cM followed by fine-point mapping in all regions of the genome that gave positive LOD scores. SimWalk2 software was used for multipoint linkage based on AD and autosomal recessive (AR) models with a penetrance of 90% and a disease allele frequency of 0.001. RESULTS: A maximum multipoint LOD score of 3.22 was achieved under an AD model at microsatellite marker D10S1643. Fine point mapping and haplotype analysis defined a critical region of 2.67 cM on chromosome 10q21.1. Haplotype analysis demonstrated two distinct haplotypes segregating with high-grade myopia, indicative of two distinct mutations occurring in the same gene. CONCLUSIONS: We have identified a presumptive myopia locus for high-grade myopia based on linkage and haplotype analysis. Molecular Vision 2007-02-15 /pmc/articles/PMC2633468/ /pubmed/17327828 Text en http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Nallasamy, Sudha
Paluru, Prasuna C.
Devoto, Marcella
Wasserman, Nora F.
Zhou, Jie
Young, Terri L.
Genetic linkage study of high-grade myopia in a Hutterite population from South Dakota
title Genetic linkage study of high-grade myopia in a Hutterite population from South Dakota
title_full Genetic linkage study of high-grade myopia in a Hutterite population from South Dakota
title_fullStr Genetic linkage study of high-grade myopia in a Hutterite population from South Dakota
title_full_unstemmed Genetic linkage study of high-grade myopia in a Hutterite population from South Dakota
title_short Genetic linkage study of high-grade myopia in a Hutterite population from South Dakota
title_sort genetic linkage study of high-grade myopia in a hutterite population from south dakota
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2633468/
https://www.ncbi.nlm.nih.gov/pubmed/17327828
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