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Genetic linkage study of high-grade myopia in a Hutterite population from South Dakota
PURPOSE: Myopia is a common, complex disorder, and severe forms have implications for blindness due to increased risk of premature cataracts, glaucoma, retinal detachment, and macular degeneration. Autosomal dominant (AD) non-syndromic high-grade myopia has been mapped to chromosomes 18p11.31, 12q21...
Autores principales: | , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Molecular Vision
2007
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2633468/ https://www.ncbi.nlm.nih.gov/pubmed/17327828 |
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author | Nallasamy, Sudha Paluru, Prasuna C. Devoto, Marcella Wasserman, Nora F. Zhou, Jie Young, Terri L. |
author_facet | Nallasamy, Sudha Paluru, Prasuna C. Devoto, Marcella Wasserman, Nora F. Zhou, Jie Young, Terri L. |
author_sort | Nallasamy, Sudha |
collection | PubMed |
description | PURPOSE: Myopia is a common, complex disorder, and severe forms have implications for blindness due to increased risk of premature cataracts, glaucoma, retinal detachment, and macular degeneration. Autosomal dominant (AD) non-syndromic high-grade myopia has been mapped to chromosomes 18p11.31, 12q21-23, 17q21-23, 7q36, 2q37.1, 7p15.3, 15q12-13, 3q26, 4q12, 8p23, 4q22-q27, 1p36, and Xq23-q25. Here, we demonstrate evidence of linkage for AD non-syndromic high-grade myopia in a large Hutterite family to a locus on chromosome 10q21.1. METHODS: After clinical evaluation, genomic DNA was genotyped from 29 members of a Hutterite family from South Dakota (7 affected). The average refractive error of affected individuals was -7.04 diopters. Microsatellite markers were used to exclude linkage to the known AD nonsyndromic high-grade myopia loci as well as to syndromic high-grade myopia loci. A genome screen was then performed using 382 markers with an average inter-marker distance of 10 cM followed by fine-point mapping in all regions of the genome that gave positive LOD scores. SimWalk2 software was used for multipoint linkage based on AD and autosomal recessive (AR) models with a penetrance of 90% and a disease allele frequency of 0.001. RESULTS: A maximum multipoint LOD score of 3.22 was achieved under an AD model at microsatellite marker D10S1643. Fine point mapping and haplotype analysis defined a critical region of 2.67 cM on chromosome 10q21.1. Haplotype analysis demonstrated two distinct haplotypes segregating with high-grade myopia, indicative of two distinct mutations occurring in the same gene. CONCLUSIONS: We have identified a presumptive myopia locus for high-grade myopia based on linkage and haplotype analysis. |
format | Text |
id | pubmed-2633468 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2007 |
publisher | Molecular Vision |
record_format | MEDLINE/PubMed |
spelling | pubmed-26334682009-02-02 Genetic linkage study of high-grade myopia in a Hutterite population from South Dakota Nallasamy, Sudha Paluru, Prasuna C. Devoto, Marcella Wasserman, Nora F. Zhou, Jie Young, Terri L. Mol Vis Research Article PURPOSE: Myopia is a common, complex disorder, and severe forms have implications for blindness due to increased risk of premature cataracts, glaucoma, retinal detachment, and macular degeneration. Autosomal dominant (AD) non-syndromic high-grade myopia has been mapped to chromosomes 18p11.31, 12q21-23, 17q21-23, 7q36, 2q37.1, 7p15.3, 15q12-13, 3q26, 4q12, 8p23, 4q22-q27, 1p36, and Xq23-q25. Here, we demonstrate evidence of linkage for AD non-syndromic high-grade myopia in a large Hutterite family to a locus on chromosome 10q21.1. METHODS: After clinical evaluation, genomic DNA was genotyped from 29 members of a Hutterite family from South Dakota (7 affected). The average refractive error of affected individuals was -7.04 diopters. Microsatellite markers were used to exclude linkage to the known AD nonsyndromic high-grade myopia loci as well as to syndromic high-grade myopia loci. A genome screen was then performed using 382 markers with an average inter-marker distance of 10 cM followed by fine-point mapping in all regions of the genome that gave positive LOD scores. SimWalk2 software was used for multipoint linkage based on AD and autosomal recessive (AR) models with a penetrance of 90% and a disease allele frequency of 0.001. RESULTS: A maximum multipoint LOD score of 3.22 was achieved under an AD model at microsatellite marker D10S1643. Fine point mapping and haplotype analysis defined a critical region of 2.67 cM on chromosome 10q21.1. Haplotype analysis demonstrated two distinct haplotypes segregating with high-grade myopia, indicative of two distinct mutations occurring in the same gene. CONCLUSIONS: We have identified a presumptive myopia locus for high-grade myopia based on linkage and haplotype analysis. Molecular Vision 2007-02-15 /pmc/articles/PMC2633468/ /pubmed/17327828 Text en http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Nallasamy, Sudha Paluru, Prasuna C. Devoto, Marcella Wasserman, Nora F. Zhou, Jie Young, Terri L. Genetic linkage study of high-grade myopia in a Hutterite population from South Dakota |
title | Genetic linkage study of high-grade myopia in a Hutterite population from South Dakota |
title_full | Genetic linkage study of high-grade myopia in a Hutterite population from South Dakota |
title_fullStr | Genetic linkage study of high-grade myopia in a Hutterite population from South Dakota |
title_full_unstemmed | Genetic linkage study of high-grade myopia in a Hutterite population from South Dakota |
title_short | Genetic linkage study of high-grade myopia in a Hutterite population from South Dakota |
title_sort | genetic linkage study of high-grade myopia in a hutterite population from south dakota |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2633468/ https://www.ncbi.nlm.nih.gov/pubmed/17327828 |
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