Cargando…

Improved Disorder Prediction by Combination of Orthogonal Approaches

Disordered proteins are highly abundant in regulatory processes such as transcription and cell-signaling. Different methods have been developed to predict protein disorder often focusing on different types of disordered regions. Here, we present MD, a novel META-Disorder prediction method that molds...

Descripción completa

Detalles Bibliográficos
Autores principales: Schlessinger, Avner, Punta, Marco, Yachdav, Guy, Kajan, Laszlo, Rost, Burkhard
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2635965/
https://www.ncbi.nlm.nih.gov/pubmed/19209228
http://dx.doi.org/10.1371/journal.pone.0004433
_version_ 1782164240784687104
author Schlessinger, Avner
Punta, Marco
Yachdav, Guy
Kajan, Laszlo
Rost, Burkhard
author_facet Schlessinger, Avner
Punta, Marco
Yachdav, Guy
Kajan, Laszlo
Rost, Burkhard
author_sort Schlessinger, Avner
collection PubMed
description Disordered proteins are highly abundant in regulatory processes such as transcription and cell-signaling. Different methods have been developed to predict protein disorder often focusing on different types of disordered regions. Here, we present MD, a novel META-Disorder prediction method that molds various sources of information predominantly obtained from orthogonal prediction methods, to significantly improve in performance over its constituents. In sustained cross-validation, MD not only outperforms its origins, but it also compares favorably to other state-of-the-art prediction methods in a variety of tests that we applied. Availability: http://www.rostlab.org/services/md/
format Text
id pubmed-2635965
institution National Center for Biotechnology Information
language English
publishDate 2009
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-26359652009-02-11 Improved Disorder Prediction by Combination of Orthogonal Approaches Schlessinger, Avner Punta, Marco Yachdav, Guy Kajan, Laszlo Rost, Burkhard PLoS One Research Article Disordered proteins are highly abundant in regulatory processes such as transcription and cell-signaling. Different methods have been developed to predict protein disorder often focusing on different types of disordered regions. Here, we present MD, a novel META-Disorder prediction method that molds various sources of information predominantly obtained from orthogonal prediction methods, to significantly improve in performance over its constituents. In sustained cross-validation, MD not only outperforms its origins, but it also compares favorably to other state-of-the-art prediction methods in a variety of tests that we applied. Availability: http://www.rostlab.org/services/md/ Public Library of Science 2009-02-11 /pmc/articles/PMC2635965/ /pubmed/19209228 http://dx.doi.org/10.1371/journal.pone.0004433 Text en Schlessinger et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Schlessinger, Avner
Punta, Marco
Yachdav, Guy
Kajan, Laszlo
Rost, Burkhard
Improved Disorder Prediction by Combination of Orthogonal Approaches
title Improved Disorder Prediction by Combination of Orthogonal Approaches
title_full Improved Disorder Prediction by Combination of Orthogonal Approaches
title_fullStr Improved Disorder Prediction by Combination of Orthogonal Approaches
title_full_unstemmed Improved Disorder Prediction by Combination of Orthogonal Approaches
title_short Improved Disorder Prediction by Combination of Orthogonal Approaches
title_sort improved disorder prediction by combination of orthogonal approaches
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2635965/
https://www.ncbi.nlm.nih.gov/pubmed/19209228
http://dx.doi.org/10.1371/journal.pone.0004433
work_keys_str_mv AT schlessingeravner improveddisorderpredictionbycombinationoforthogonalapproaches
AT puntamarco improveddisorderpredictionbycombinationoforthogonalapproaches
AT yachdavguy improveddisorderpredictionbycombinationoforthogonalapproaches
AT kajanlaszlo improveddisorderpredictionbycombinationoforthogonalapproaches
AT rostburkhard improveddisorderpredictionbycombinationoforthogonalapproaches