Cargando…

Simultaneous analysis of distinct Omics data sets with integration of biological knowledge: Multiple Factor Analysis approach

BACKGROUND: Genomic analysis will greatly benefit from considering in a global way various sources of molecular data with the related biological knowledge. It is thus of great importance to provide useful integrative approaches dedicated to ease the interpretation of microarray data. RESULTS: Here,...

Descripción completa

Detalles Bibliográficos
Autores principales:	de Tayrac, Marie, Lê, Sébastien, Aubry, Marc, Mosser, Jean, Husson, François
Formato:	Texto
Lenguaje:	English
Publicado:	BioMed Central 2009
Materias:	Methodology Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2636827/ https://www.ncbi.nlm.nih.gov/pubmed/19154582 http://dx.doi.org/10.1186/1471-2164-10-32

Ejemplares similares

Combining evidence, biomedical literature and statistical dependence: new insights for functional annotation of gene sets
por: Aubry, Marc, et al.
Publicado: (2006)

Visualising associations between paired ‘omics’ data sets
por: González, Ignacio, et al.
Publicado: (2012)

A flexible representation of omic knowledge for thorough analysis of microarray data
por: Hasegawa, Yoshikazu, et al.
Publicado: (2006)

A new unsupervised gene clustering algorithm based on the integration of biological knowledge into expression data
por: Verbanck, Marie, et al.
Publicado: (2013)

Integration of transcriptome and proteome profiles in glioblastoma: looking for the missing link
por: Lemée, Jean-Michel, et al.
Publicado: (2018)

Integrated genomic analysis of biological gene sets with applications in lung cancer prognosis
por: Chu, Su Hee, et al.
Publicado: (2017)

Sparse multiple co-Inertia analysis with application to integrative analysis of multi -Omics data
por: Min, Eun Jeong, et al.
Publicado: (2020)

An integrative U method for joint analysis of multi-level omic data
por: Geng, Pei, et al.
Publicado: (2019)

Multi–omic analysis of signalling factors in inflammatory comorbidities
por: Xiao, Hui, et al.
Publicado: (2018)

Characterization of the Effectiveness of Reporting Lists of Small Feature Sets Relative to the Accuracy of the Prior Biological Knowledge
por: Zhao, Chen, et al.
Publicado: (2010)

Causal modeling in a multi-omic setting: insights from GAW20
por: Auerbach, Jonathan, et al.
Publicado: (2018)

A whitening approach to probabilistic canonical correlation analysis for omics data integration
por: Jendoubi, Takoua, et al.
Publicado: (2019)

Meta-analytic support vector machine for integrating multiple omics data
por: Kim, SungHwan, et al.
Publicado: (2017)

Prognostic Significance of EDN/RB, HJURP, p60/CAF-1 and PDLI4, Four New Markers in High-Grade Gliomas
por: de Tayrac, Marie, et al.
Publicado: (2013)

‘From the core to beyond the margin’: a genomic picture of glioblastoma intratumor heterogeneity
por: Aubry, Marc, et al.
Publicado: (2015)

Correction: From the core to beyond the margin: a genomic picture of glioblastoma intratumor heterogeneity
por: Aubry, Marc, et al.
Publicado: (2016)

Integrating biological knowledge into variable selection: an empirical Bayes approach with an application in cancer biology
por: Hill, Steven M, et al.
Publicado: (2012)

Handling missing rows in multi-omics data integration: multiple imputation in multiple factor analysis framework
por: Voillet, Valentin, et al.
Publicado: (2016)

A multivariate approach to the integration of multi-omics datasets
por: Meng, Chen, et al.
Publicado: (2014)

An integrative imputation method based on multi-omics datasets
por: Lin, Dongdong, et al.
Publicado: (2016)

Sparse reduced-rank regression for integrating omics data
por: Hilafu, Haileab, et al.
Publicado: (2020)

Microbial risk score for capturing microbial characteristics, integrating multi-omics data, and predicting disease risk
por: Wang, Chan, et al.
Publicado: (2022)

Comparison of cancer subtype identification methods combined with feature selection methods in omics data analysis
por: Park, JiYoon, et al.
Publicado: (2023)

A fast and inexpensive genotyping system for the simultaneous analysis of human and Aedes albopictus short tandem repeats
por: Albó Timor, Andreu, et al.
Publicado: (2023)

PGxO and PGxLOD: a reconciliation of pharmacogenomic knowledge of various provenances, enabling further comparison
por: Monnin, Pierre, et al.
Publicado: (2019)

Integrative multi-omics reveals two biologically distinct groups of pilocytic astrocytoma
por: Picard, Daniel, et al.
Publicado: (2023)

MuSeeQ, a novel supervised image analysis tool for the simultaneous phenotyping of the soluble mucilage and seed morphometric parameters
por: Miart, Fabien, et al.
Publicado: (2018)

Dual KS: Defining Gene Sets with Tissue Set Enrichment Analysis
por: Yang, Yarong, et al.
Publicado: (2010)

Statistical integration of two omics datasets using GO2PLS
por: Gu, Zhujie, et al.
Publicado: (2021)

A Novel Approach for the Simultaneous Analysis of Common and Rare Variants in Complex Traits
por: Yuan, Ao, et al.
Publicado: (2012)

Simultaneous Analysis of Common and Rare Variants in Complex Traits: Application to SNPs (SCARVAsnp)
por: Chen, Guanjie, et al.
Publicado: (2012)

Significant distinct branches of hierarchical trees: a framework for statistical analysis and applications to biological data
por: Sun, Guoli, et al.
Publicado: (2014)

Integration method of 3D MR spectroscopy into treatment planning system for glioblastoma IMRT dose painting with integrated simultaneous boost
por: Ken, Soléakhéna, et al.
Publicado: (2013)

Integrating external biological knowledge in the construction of regulatory networks from time-series expression data
por: Lo, Kenneth, et al.
Publicado: (2012)

A data management infrastructure for the integration of imaging and omics data in life sciences
por: Kuhn Cuellar, Luis, et al.
Publicado: (2022)

Correlation set analysis: detecting active regulators in disease populations using prior causal knowledge
por: Huang, Chia-Ling, et al.
Publicado: (2012)

Integrated intra‐ and intercellular signaling knowledge for multicellular omics analysis
por: Türei, Dénes, et al.
Publicado: (2021)

Confero: an integrated contrast data and gene set platform for computational analysis and biological interpretation of omics data
por: Hermida, Leandro, et al.
Publicado: (2013)

Diverse convergent evidence in the genetic analysis of complex disease: coordinating omic, informatic, and experimental evidence to better identify and validate risk factors
por: Ciesielski, Timothy H, et al.
Publicado: (2014)

Multilevel omic data integration in cancer cell lines: advanced annotation and emergent properties
por: Liu, Yuanhua, et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_bee3rqil4443opm4rbjk52iul6