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Detecting coevolution without phylogenetic trees? Tree-ignorant metrics of coevolution perform as well as tree-aware metrics
BACKGROUND: Identifying coevolving positions in protein sequences has myriad applications, ranging from understanding and predicting the structure of single molecules to generating proteome-wide predictions of interactions. Algorithms for detecting coevolving positions can be classified into two cat...
Autores principales: | Caporaso, J Gregory, Smit, Sandra, Easton, Brett C, Hunter, Lawrence, Huttley, Gavin A, Knight, Rob |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2008
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2637866/ https://www.ncbi.nlm.nih.gov/pubmed/19055758 http://dx.doi.org/10.1186/1471-2148-8-327 |
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