PlantGM: a database for genetic markers in rice (Oryza sativa) and Chinese cabbage (Brassica rapa)

The Plant Genetic Map Database (PlantGM) has been developed as a web-based system which provides information about genetic markers in rice (Oryza sativa) and Chinese cabbage (Brassica rapa). The database has three major parts and functions; (1) Map Search, (2) Marker Search, and (3) QTL Search. At p...

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Detalles Bibliográficos
Autores principales: Kim, Chang Kug, Kim, Jung Sun, Lee, Gang Seob, Park, Beom Seok, Hahn, Jang Ho
Formato: Texto
Lenguaje:English
Publicado: Biomedical Informatics Publishing Group 2008
Materias:
Database
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2637951/
https://www.ncbi.nlm.nih.gov/pubmed/19238232
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author Kim, Chang Kug
Kim, Jung Sun
Lee, Gang Seob
Park, Beom Seok
Hahn, Jang Ho
author_facet Kim, Chang Kug
Kim, Jung Sun
Lee, Gang Seob
Park, Beom Seok
Hahn, Jang Ho
author_sort Kim, Chang Kug
collection PubMed
description The Plant Genetic Map Database (PlantGM) has been developed as a web-based system which provides information about genetic markers in rice (Oryza sativa) and Chinese cabbage (Brassica rapa). The database has three major parts and functions; (1) Map Search, (2) Marker Search, and (3) QTL Search. At present, the database provides characterization information for about 3258 genetic markers. It has 2800 RFLP and 112 QTL markers related to rice in addition to 321 RFLP and 25 PCR-based markers for Chinese cabbage. In addition, a genetic linkage map was also constructed by using 1,054 markers from 2,912 markers in rice. AVAILABILITY: The database is available for free at http://www.niab.go.kr/nabic/PlantGM
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spelling pubmed-26379512009-02-23 PlantGM: a database for genetic markers in rice (Oryza sativa) and Chinese cabbage (Brassica rapa) Kim, Chang Kug Kim, Jung Sun Lee, Gang Seob Park, Beom Seok Hahn, Jang Ho Bioinformation Database The Plant Genetic Map Database (PlantGM) has been developed as a web-based system which provides information about genetic markers in rice (Oryza sativa) and Chinese cabbage (Brassica rapa). The database has three major parts and functions; (1) Map Search, (2) Marker Search, and (3) QTL Search. At present, the database provides characterization information for about 3258 genetic markers. It has 2800 RFLP and 112 QTL markers related to rice in addition to 321 RFLP and 25 PCR-based markers for Chinese cabbage. In addition, a genetic linkage map was also constructed by using 1,054 markers from 2,912 markers in rice. AVAILABILITY: The database is available for free at http://www.niab.go.kr/nabic/PlantGM Biomedical Informatics Publishing Group 2008-10-17 /pmc/articles/PMC2637951/ /pubmed/19238232 Text en © 2007 Biomedical Informatics Publishing Group This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Database
Kim, Chang Kug
Kim, Jung Sun
Lee, Gang Seob
Park, Beom Seok
Hahn, Jang Ho
PlantGM: a database for genetic markers in rice (Oryza sativa) and Chinese cabbage (Brassica rapa)
title PlantGM: a database for genetic markers in rice (Oryza sativa) and Chinese cabbage (Brassica rapa)
title_full PlantGM: a database for genetic markers in rice (Oryza sativa) and Chinese cabbage (Brassica rapa)
title_fullStr PlantGM: a database for genetic markers in rice (Oryza sativa) and Chinese cabbage (Brassica rapa)
title_full_unstemmed PlantGM: a database for genetic markers in rice (Oryza sativa) and Chinese cabbage (Brassica rapa)
title_short PlantGM: a database for genetic markers in rice (Oryza sativa) and Chinese cabbage (Brassica rapa)
title_sort plantgm: a database for genetic markers in rice (oryza sativa) and chinese cabbage (brassica rapa)
topic Database
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2637951/
https://www.ncbi.nlm.nih.gov/pubmed/19238232
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