MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB

Summary: The MAGE-TAB format for microarray data representation and exchange has been proposed by the microarray community to replace the more complex MAGE-ML format. We present a suite of tools to support MAGE-TAB generation and validation, conversion between existing formats for data exchange, vis...

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Detalles Bibliográficos
Autores principales: Rayner, Tim F., Rezwan, Faisal Ibne, Lukk, Margus, Bradley, Xiangqun Zheng, Farne, Anna, Holloway, Ele, Malone, James, Williams, Eleanor, Parkinson, Helen
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2638998/
https://www.ncbi.nlm.nih.gov/pubmed/19038988
http://dx.doi.org/10.1093/bioinformatics/btn617
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author Rayner, Tim F.
Rezwan, Faisal Ibne
Lukk, Margus
Bradley, Xiangqun Zheng
Farne, Anna
Holloway, Ele
Malone, James
Williams, Eleanor
Parkinson, Helen
author_facet Rayner, Tim F.
Rezwan, Faisal Ibne
Lukk, Margus
Bradley, Xiangqun Zheng
Farne, Anna
Holloway, Ele
Malone, James
Williams, Eleanor
Parkinson, Helen
author_sort Rayner, Tim F.
collection PubMed
description Summary: The MAGE-TAB format for microarray data representation and exchange has been proposed by the microarray community to replace the more complex MAGE-ML format. We present a suite of tools to support MAGE-TAB generation and validation, conversion between existing formats for data exchange, visualization of the experiment designs encoded by MAGE-TAB documents and the mining of such documents for semantic content. Availability: Software is available from http://tab2mage.sourceforge.net/ Contact: tfrayner@gmail.com
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spelling pubmed-26389982009-02-25 MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB Rayner, Tim F. Rezwan, Faisal Ibne Lukk, Margus Bradley, Xiangqun Zheng Farne, Anna Holloway, Ele Malone, James Williams, Eleanor Parkinson, Helen Bioinformatics Applications Note Summary: The MAGE-TAB format for microarray data representation and exchange has been proposed by the microarray community to replace the more complex MAGE-ML format. We present a suite of tools to support MAGE-TAB generation and validation, conversion between existing formats for data exchange, visualization of the experiment designs encoded by MAGE-TAB documents and the mining of such documents for semantic content. Availability: Software is available from http://tab2mage.sourceforge.net/ Contact: tfrayner@gmail.com Oxford University Press 2009-01-15 2008-09-30 /pmc/articles/PMC2638998/ /pubmed/19038988 http://dx.doi.org/10.1093/bioinformatics/btn617 Text en © 2008 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Applications Note
Rayner, Tim F.
Rezwan, Faisal Ibne
Lukk, Margus
Bradley, Xiangqun Zheng
Farne, Anna
Holloway, Ele
Malone, James
Williams, Eleanor
Parkinson, Helen
MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB
title MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB
title_full MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB
title_fullStr MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB
title_full_unstemmed MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB
title_short MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB
title_sort magetabulator, a suite of tools to support the microarray data format mage-tab
topic Applications Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2638998/
https://www.ncbi.nlm.nih.gov/pubmed/19038988
http://dx.doi.org/10.1093/bioinformatics/btn617
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