POPE—a tool to aid high-throughput phylogenetic analysis

Summary: POPE (Phylogeny, Ortholog and Paralog Extractor) provides an integrated platform for automatic ortholog identification. Intermediate steps can be visualized, modified and analyzed in order to assess and improve the underlying quality of orthology and paralogy assignments. Availability: POPE...

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Detalles Bibliográficos
Autores principales: Juliusdottir, Thorhildur, Pettersson, Fredrik, Copley, Richard R.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2008
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2639271/
https://www.ncbi.nlm.nih.gov/pubmed/18849569
http://dx.doi.org/10.1093/bioinformatics/btn533
Descripción
Sumario:Summary: POPE (Phylogeny, Ortholog and Paralog Extractor) provides an integrated platform for automatic ortholog identification. Intermediate steps can be visualized, modified and analyzed in order to assess and improve the underlying quality of orthology and paralogy assignments. Availability: POPE is available for download from the website: http://www.well.ox.ac.uk/~tota/pope. Contact: tota@well.ox.ac.uk

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