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Integrating T-cell epitope annotations with sequence and structural information using DAS
Immunoinformatics is an emerging new field that benefits from computational analyses and tools that facilitate the understanding of the immune system. A large number of immunoinformatics resources such as immune-related databases and analysis software are available through the World Wide Web for the...
Autores principales: | , , |
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Formato: | Texto |
Lenguaje: | English |
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Biomedical Informatics Publishing Group
2008
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2639660/ https://www.ncbi.nlm.nih.gov/pubmed/19238238 |
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author | Diez-Rivero, Carmen M García-Boronat, María A Reche, Pedro |
author_facet | Diez-Rivero, Carmen M García-Boronat, María A Reche, Pedro |
author_sort | Diez-Rivero, Carmen M |
collection | PubMed |
description | Immunoinformatics is an emerging new field that benefits from computational analyses and tools that facilitate the understanding of the immune system. A large number of immunoinformatics resources such as immune-related databases and analysis software are available through the World Wide Web for the benefit of the research community. However, immunoinformatics developments have sometimes remained isolated from mainstream bioinformatics. Therefore, there is clearly a need for integration, which will empower the exchange of data and annotations within the scientific community in a quick and efficient fashion. Here, we have chosen the Distributed Annotation System (DAS), for integrating in house annotations on experimental and predicted HLA I-restriction elements of CD8 T-cell epitopes with sequence and structural information. |
format | Text |
id | pubmed-2639660 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | Biomedical Informatics Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-26396602009-02-23 Integrating T-cell epitope annotations with sequence and structural information using DAS Diez-Rivero, Carmen M García-Boronat, María A Reche, Pedro Bioinformation Database Immunoinformatics is an emerging new field that benefits from computational analyses and tools that facilitate the understanding of the immune system. A large number of immunoinformatics resources such as immune-related databases and analysis software are available through the World Wide Web for the benefit of the research community. However, immunoinformatics developments have sometimes remained isolated from mainstream bioinformatics. Therefore, there is clearly a need for integration, which will empower the exchange of data and annotations within the scientific community in a quick and efficient fashion. Here, we have chosen the Distributed Annotation System (DAS), for integrating in house annotations on experimental and predicted HLA I-restriction elements of CD8 T-cell epitopes with sequence and structural information. Biomedical Informatics Publishing Group 2008-12-06 /pmc/articles/PMC2639660/ /pubmed/19238238 Text en © 2007 Biomedical Informatics Publishing Group This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited. |
spellingShingle | Database Diez-Rivero, Carmen M García-Boronat, María A Reche, Pedro Integrating T-cell epitope annotations with sequence and structural information using DAS |
title | Integrating T-cell epitope annotations with sequence and structural information using DAS |
title_full | Integrating T-cell epitope annotations with sequence and structural information using DAS |
title_fullStr | Integrating T-cell epitope annotations with sequence and structural information using DAS |
title_full_unstemmed | Integrating T-cell epitope annotations with sequence and structural information using DAS |
title_short | Integrating T-cell epitope annotations with sequence and structural information using DAS |
title_sort | integrating t-cell epitope annotations with sequence and structural information using das |
topic | Database |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2639660/ https://www.ncbi.nlm.nih.gov/pubmed/19238238 |
work_keys_str_mv | AT diezriverocarmenm integratingtcellepitopeannotationswithsequenceandstructuralinformationusingdas AT garciaboronatmaria integratingtcellepitopeannotationswithsequenceandstructuralinformationusingdas AT arechepedro integratingtcellepitopeannotationswithsequenceandstructuralinformationusingdas |