BIOFFORC: Tool development for biological file format conversion

The use of bioinformatics tools require different sequence formats at various instances. Every tool uses specific set of formats for processing. Sequence in one format is often required in another format. Thus, there is a need for sequence format conversion. A number of such tools are available in t...

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Detalles Bibliográficos
Autores principales: Vinobha, Chinnaiah Swaminathan, Rajadurai, Maruthamuthu, Rajasekaran, Ekambaram
Formato: Texto
Lenguaje:English
Publicado: Biomedical Informatics Publishing Group 2008
Materias:
Web Server
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2639671/
https://www.ncbi.nlm.nih.gov/pubmed/19238194
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author Vinobha, Chinnaiah Swaminathan
Rajadurai, Maruthamuthu
Rajasekaran, Ekambaram
author_facet Vinobha, Chinnaiah Swaminathan
Rajadurai, Maruthamuthu
Rajasekaran, Ekambaram
author_sort Vinobha, Chinnaiah Swaminathan
collection PubMed
description The use of bioinformatics tools require different sequence formats at various instances. Every tool uses specific set of formats for processing. Sequence in one format is often required in another format. Thus, there is a need for sequence format conversion. A number of such tools are available in the public domain. Here, we describe BIOFFORC as a file format converter. The tool is developed with a graphical user interface in PERL. AVAILABILITY: http://www.winningpath.com/biofforc/
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spelling pubmed-26396712009-02-23 BIOFFORC: Tool development for biological file format conversion Vinobha, Chinnaiah Swaminathan Rajadurai, Maruthamuthu Rajasekaran, Ekambaram Bioinformation Web Server The use of bioinformatics tools require different sequence formats at various instances. Every tool uses specific set of formats for processing. Sequence in one format is often required in another format. Thus, there is a need for sequence format conversion. A number of such tools are available in the public domain. Here, we describe BIOFFORC as a file format converter. The tool is developed with a graphical user interface in PERL. AVAILABILITY: http://www.winningpath.com/biofforc/ Biomedical Informatics Publishing Group 2008-10-25 /pmc/articles/PMC2639671/ /pubmed/19238194 Text en © 2007 Biomedical Informatics Publishing Group This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Web Server
Vinobha, Chinnaiah Swaminathan
Rajadurai, Maruthamuthu
Rajasekaran, Ekambaram
BIOFFORC: Tool development for biological file format conversion
title BIOFFORC: Tool development for biological file format conversion
title_full BIOFFORC: Tool development for biological file format conversion
title_fullStr BIOFFORC: Tool development for biological file format conversion
title_full_unstemmed BIOFFORC: Tool development for biological file format conversion
title_short BIOFFORC: Tool development for biological file format conversion
title_sort biofforc: tool development for biological file format conversion
topic Web Server
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2639671/
https://www.ncbi.nlm.nih.gov/pubmed/19238194
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AT rajasekaranekambaram biofforctooldevelopmentforbiologicalfileformatconversion

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