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Molecular modelling of the TSR domain of R-spondin 4
R-spondin 4 is a secreted protein mainly associated with embryonic nail development. R-spondins have been recently identified as heparin-binding proteins with high affinity. Proteoglycan binding has been associated with both the TSR and the C terminal basic amino acid rich domains. In this paper, mo...
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Formato: | Texto |
Lenguaje: | English |
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Biomedical Informatics Publishing Group
2008
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2639684/ https://www.ncbi.nlm.nih.gov/pubmed/19238248 |
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author | Ayadi, Leila |
author_facet | Ayadi, Leila |
author_sort | Ayadi, Leila |
collection | PubMed |
description | R-spondin 4 is a secreted protein mainly associated with embryonic nail development. R-spondins have been recently identified as heparin-binding proteins with high affinity. Proteoglycan binding has been associated with both the TSR and the C terminal basic amino acid rich domains. In this paper, molecular modelling techniques were used to construct the model of R-spondin 4 TSR domain based on the structure of the F-spondin TSR domain 4 (30-40¢ sequence identity). Beside a positively charged surface in the TSR domain, presence of the basic amino acid rich domain which could forms a continuous heparin binding surface may explain the high affinity of R-spondins for heparin. Our results provide a framework for understanding the possible regulatory role of heparin in R-spondins signalling. |
format | Text |
id | pubmed-2639684 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | Biomedical Informatics Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-26396842009-02-23 Molecular modelling of the TSR domain of R-spondin 4 Ayadi, Leila Bioinformation Hypothesis R-spondin 4 is a secreted protein mainly associated with embryonic nail development. R-spondins have been recently identified as heparin-binding proteins with high affinity. Proteoglycan binding has been associated with both the TSR and the C terminal basic amino acid rich domains. In this paper, molecular modelling techniques were used to construct the model of R-spondin 4 TSR domain based on the structure of the F-spondin TSR domain 4 (30-40¢ sequence identity). Beside a positively charged surface in the TSR domain, presence of the basic amino acid rich domain which could forms a continuous heparin binding surface may explain the high affinity of R-spondins for heparin. Our results provide a framework for understanding the possible regulatory role of heparin in R-spondins signalling. Biomedical Informatics Publishing Group 2008-11-02 /pmc/articles/PMC2639684/ /pubmed/19238248 Text en © 2007 Biomedical Informatics Publishing Group This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited. |
spellingShingle | Hypothesis Ayadi, Leila Molecular modelling of the TSR domain of R-spondin 4 |
title | Molecular modelling of the TSR domain of R-spondin 4 |
title_full | Molecular modelling of the TSR domain of R-spondin 4 |
title_fullStr | Molecular modelling of the TSR domain of R-spondin 4 |
title_full_unstemmed | Molecular modelling of the TSR domain of R-spondin 4 |
title_short | Molecular modelling of the TSR domain of R-spondin 4 |
title_sort | molecular modelling of the tsr domain of r-spondin 4 |
topic | Hypothesis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2639684/ https://www.ncbi.nlm.nih.gov/pubmed/19238248 |
work_keys_str_mv | AT ayadileila molecularmodellingofthetsrdomainofrspondin4 |