Cargando…

Human-macaque comparisons illuminate variation in neutral substitution rates

BACKGROUND: The evolutionary distance between human and macaque is particularly attractive for investigating local variation in neutral substitution rates, because substitutions can be inferred more reliably than in comparisons with rodents and are less influenced by the effects of current and ancie...

Descripción completa

Detalles Bibliográficos
Autores principales:	Tyekucheva, Svitlana, Makova, Kateryna D, Karro, John E, Hardison, Ross C, Miller, Webb, Chiaromonte, Francesca
Formato:	Texto
Lenguaje:	English
Publicado:	BioMed Central 2008
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2643947/ https://www.ncbi.nlm.nih.gov/pubmed/18447906 http://dx.doi.org/10.1186/gb-2008-9-4-r76

Ejemplares similares

A Macaque's-Eye View of Human Insertions and Deletions: Differences in Mechanisms
por: Kvikstad, Erika M, et al.
Publicado: (2007)

Genomic Environment Predicts Expression Patterns on the Human Inactive X Chromosome
por: Carrel, Laura, et al.
Publicado: (2006)

A genome-wide view of mutation rate co-variation using multivariate analyses
por: Ananda, Guruprasad, et al.
Publicado: (2011)

Non-B DNA: a major contributor to small- and large-scale variation in nucleotide substitution frequencies across the genome
por: Guiblet, Wilfried M, et al.
Publicado: (2021)

Weak preservation of local neutral substitution rates across mammalian genomes
por: Imamura, Hideo, et al.
Publicado: (2009)

Advanced age increases frequencies of de novo mitochondrial mutations in macaque oocytes and somatic tissues
por: Arbeithuber, Barbara, et al.
Publicado: (2022)

A genome-wide analysis of common fragile sites: What features determine chromosomal instability in the human genome?
por: Fungtammasan, Arkarachai, et al.
Publicado: (2012)

Integration and Fixation Preferences of Human and Mouse Endogenous Retroviruses Uncovered with Functional Data Analysis
por: Campos-Sánchez, Rebeca, et al.
Publicado: (2016)

High Satellite Repeat Turnover in Great Apes Studied with Short- and Long-Read Technologies
por: Cechova, Monika, et al.
Publicado: (2019)

Long-read sequencing technology indicates genome-wide effects of non-B DNA on polymerization speed and error rate
por: Guiblet, Wilfried M., et al.
Publicado: (2018)

What Is a Microsatellite: A Computational and Experimental Definition Based upon Repeat Mutational Behavior at A/T and GT/AC Repeats
por: Kelkar, Yogeshwar D., et al.
Publicado: (2010)

Distinct Mutational Behaviors Differentiate Short Tandem Repeats from Microsatellites in the Human Genome
por: Ananda, Guruprasad, et al.
Publicado: (2013)

Selection and thermostability suggest G-quadruplexes are novel functional elements of the human genome
por: Guiblet, Wilfried M., et al.
Publicado: (2021)

Rescuing Alu: Recovery of New Inserts Shows LINE-1 Preserves Alu Activity through A-Tail Expansion
por: Wagstaff, Bradley J., et al.
Publicado: (2012)

Conservation of Neutral Substitution Rate and Substitutional Asymmetries in Mammalian Genes
por: Mugal, C.F., et al.
Publicado: (2010)

Age-related accumulation of de novo mitochondrial mutations in mammalian oocytes and somatic tissues
por: Arbeithuber, Barbara, et al.
Publicado: (2020)

Dosage regulation, and variation in gene expression and copy number of human Y chromosome ampliconic genes
por: Vegesna, Rahulsimham, et al.
Publicado: (2019)

Primary sequence and epigenetic determinants of in vivo occupancy of genomic DNA by GATA1
por: Zhang, Ying, et al.
Publicado: (2009)

Accurate sequencing of DNA motifs able to form alternative (non-B) structures
por: Weissensteiner, Matthias H., et al.
Publicado: (2023)

Generation time, life history and the substitution rate of neutral mutations
por: Lehtonen, Jussi, et al.
Publicado: (2014)

Nucleotide Substitutions during Speciation may Explain Substitution Rate Variation
por: Janzen, Thijs, et al.
Publicado: (2021)

Integrating diverse genomic data using gene sets
por: Tyekucheva, Svitlana, et al.
Publicado: (2011)

Constructing a polygenic risk score for childhood obesity using functional data analysis
por: Craig, Sarah J.C., et al.
Publicado: (2023)

Illuminating the Fc dependence of SARS-CoV-2 neutralization
por: González, Joseph C., et al.
Publicado: (2021)

Coding region structural heterogeneity and turnover of transcription start sites contribute to divergence in expression between duplicate genes
por: Park, Chungoo, et al.
Publicado: (2009)

Local conservation scores without a priori assumptions on neutral substitution rates
por: Dingel, Janis, et al.
Publicado: (2008)

Phenotypic Expansion Illuminates Multilocus Pathogenic Variation
por: Karaca, Ender, et al.
Publicado: (2018)

Evolution and Survival on Eutherian Sex Chromosomes
por: Wilson, Melissa A., et al.
Publicado: (2009)

Investigating mito-nuclear interactions in human admixed populations
por: Zaidi, Arslan A., et al.
Publicado: (2019)

Exploring the Effects of Mitonuclear Interactions on Mitochondrial DNA Gene Expression in Humans
por: Torres-Gonzalez, Edmundo, et al.
Publicado: (2022)

Metabolomic profiling of stool of two‐year old children from the INSIGHT study reveals links between butyrate and child weight outcomes
por: Nandy, Debmalya, et al.
Publicado: (2021)

Correlates of substitution rate variation in mammalian protein-coding sequences
por: Welch, John J, et al.
Publicado: (2008)

Pharmacokinetics and Immunogenicity of Broadly Neutralizing HIV Monoclonal Antibodies in Macaques
por: Rosenberg, Yvonne, et al.
Publicado: (2015)

Gene Survival and Death on the Human Y Chromosome
por: Wilson Sayres, Melissa A., et al.
Publicado: (2013)

Noise-cancelling repeat finder: uncovering tandem repeats in error-prone long-read sequencing data
por: Harris, Robert S, et al.
Publicado: (2019)

Child Weight Gain Trajectories Linked To Oral Microbiota Composition
por: Craig, Sarah J. C., et al.
Publicado: (2018)

Artifactual mutations resulting from DNA lesions limit detection levels in ultrasensitive sequencing applications
por: Arbeithuber, Barbara, et al.
Publicado: (2016)

Elevated mitochondrial genome variation after 50 generations of radiation exposure in a wild rodent
por: Baker, Robert J., et al.
Publicado: (2017)

High Levels of Copy Number Variation of Ampliconic Genes across Major Human Y Haplogroups
por: Ye, Danling, et al.
Publicado: (2018)

Extensive variation in synonymous substitution rates in mitochondrial genes of seed plants
por: Mower, Jeffrey P, et al.
Publicado: (2007)

Cannot write session to /tmp/vufind_sessions/sess_v32f6dpdtoqb72r2u60st15ka1