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β‐glucuronidase of family‐2 glycosyl hydrolase: A missing member in plants
Glycosyl hydrolases hydrolyze the glycosidic bond in carbohydrates or between a carbohydrate and a non‐carbohydrate moiety. β‐glucuronidase (GUS) is classified under two glycosyl hydrolase families (2 and 79) and the family‐2 β‐glucuronidase is reported in a wide range of organisms, but not in plant...
Autores principales: | , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Biomedical Informatics Publishing Group
2008
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2646188/ https://www.ncbi.nlm.nih.gov/pubmed/19255633 |
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author | Arul, Loganathan Benita, George Sudhakar, Duraialagaraja Thayumanavan, Balsamy Balasubramanian, Ponnusamy |
author_facet | Arul, Loganathan Benita, George Sudhakar, Duraialagaraja Thayumanavan, Balsamy Balasubramanian, Ponnusamy |
author_sort | Arul, Loganathan |
collection | PubMed |
description | Glycosyl hydrolases hydrolyze the glycosidic bond in carbohydrates or between a carbohydrate and a non‐carbohydrate moiety. β‐glucuronidase (GUS) is classified under two glycosyl hydrolase families (2 and 79) and the family‐2 β‐glucuronidase is reported in a wide range of organisms, but not in plants. The family‐79 endo-β-glucuronidase (heparanase) is reported in microorganisms, vertebrates and plants. The E. coli family‐2 β‐glucuronidase (uidA) had been successfully devised as a reporter gene in plant transformation on the basis that plants do not have homologous GUS activity. On the contrary, histochemical staining with X‐Gluc was reported in wild type (non-transgenic) plants. Data shows that, family‐2 β‐glucuronidase homologous sequence is not found in plants. Further, β‐glucuronidases of family‐2 and 79 lack appreciable sequence similarity. However, the catalytic site residues, glutamic acid and tyrosine of the family‐2 β‐glucuronidase are found to be conserved in family‐79 β‐glucuronidase of plants. This led to propose that the GUS staining reported in wild type plants is largely because of the broad substrate specificity of family‐79 β-glucuronidase on X‐Gluc and not due to the family‐2 β‐glucuronidase, as the latter has been found to be missing in plants. |
format | Text |
id | pubmed-2646188 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | Biomedical Informatics Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-26461882009-03-02 β‐glucuronidase of family‐2 glycosyl hydrolase: A missing member in plants Arul, Loganathan Benita, George Sudhakar, Duraialagaraja Thayumanavan, Balsamy Balasubramanian, Ponnusamy Bioinformation Hypothesis Glycosyl hydrolases hydrolyze the glycosidic bond in carbohydrates or between a carbohydrate and a non‐carbohydrate moiety. β‐glucuronidase (GUS) is classified under two glycosyl hydrolase families (2 and 79) and the family‐2 β‐glucuronidase is reported in a wide range of organisms, but not in plants. The family‐79 endo-β-glucuronidase (heparanase) is reported in microorganisms, vertebrates and plants. The E. coli family‐2 β‐glucuronidase (uidA) had been successfully devised as a reporter gene in plant transformation on the basis that plants do not have homologous GUS activity. On the contrary, histochemical staining with X‐Gluc was reported in wild type (non-transgenic) plants. Data shows that, family‐2 β‐glucuronidase homologous sequence is not found in plants. Further, β‐glucuronidases of family‐2 and 79 lack appreciable sequence similarity. However, the catalytic site residues, glutamic acid and tyrosine of the family‐2 β‐glucuronidase are found to be conserved in family‐79 β‐glucuronidase of plants. This led to propose that the GUS staining reported in wild type plants is largely because of the broad substrate specificity of family‐79 β-glucuronidase on X‐Gluc and not due to the family‐2 β‐glucuronidase, as the latter has been found to be missing in plants. Biomedical Informatics Publishing Group 2008-12-31 /pmc/articles/PMC2646188/ /pubmed/19255633 Text en © 2008 Biomedical Informatics Publishing Group This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited. |
spellingShingle | Hypothesis Arul, Loganathan Benita, George Sudhakar, Duraialagaraja Thayumanavan, Balsamy Balasubramanian, Ponnusamy β‐glucuronidase of family‐2 glycosyl hydrolase: A missing member in plants |
title | β‐glucuronidase of family‐2 glycosyl hydrolase: A missing member in plants |
title_full | β‐glucuronidase of family‐2 glycosyl hydrolase: A missing member in plants |
title_fullStr | β‐glucuronidase of family‐2 glycosyl hydrolase: A missing member in plants |
title_full_unstemmed | β‐glucuronidase of family‐2 glycosyl hydrolase: A missing member in plants |
title_short | β‐glucuronidase of family‐2 glycosyl hydrolase: A missing member in plants |
title_sort | β‐glucuronidase of family‐2 glycosyl hydrolase: a missing member in plants |
topic | Hypothesis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2646188/ https://www.ncbi.nlm.nih.gov/pubmed/19255633 |
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