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Functional insights by comparison of modeled structures of 18kDa small heat shock protein and its mutant in Mycobacterium leprae

In this work we are proposing Homology modeled structures of Mycobacterium leprae 18kDa heat shock protein and its mutant. The more closely related structure of the small heat shock protein (sHSP) belonging to the eukaryotic species from wheat sHSP16.9 and 16.3kDa ACR1 protein from Mycobacterium tub...

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Autores principales: Rehna, Elengikal Abdul Azeez, Singh, Sanjeev Kumar, Dharmalingam, Kuppamuthu
Formato: Texto
Lenguaje:English
Publicado: Biomedical Informatics Publishing Group 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2646194/
https://www.ncbi.nlm.nih.gov/pubmed/19255639
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author Rehna, Elengikal Abdul Azeez
Singh, Sanjeev Kumar
Dharmalingam, Kuppamuthu
author_facet Rehna, Elengikal Abdul Azeez
Singh, Sanjeev Kumar
Dharmalingam, Kuppamuthu
author_sort Rehna, Elengikal Abdul Azeez
collection PubMed
description In this work we are proposing Homology modeled structures of Mycobacterium leprae 18kDa heat shock protein and its mutant. The more closely related structure of the small heat shock protein (sHSP) belonging to the eukaryotic species from wheat sHSP16.9 and 16.3kDa ACR1 protein from Mycobacterium tuberculosis were used as template structures. Each model contains an N-terminal domain, alpha-crystalline domain and a C-terminal tail. The models showed that a single point mutation from serine to proline at 52(nd) position causes structural changes. The structural changes are observed in N-terminal region and alpha-crystalline domains. Serine in 52(nd) position is observed in β4 strand and Proline in 52(nd) position is observed in loop. The number of residues contributing α helix at N-terminal region varies in both models. In 18S more number of residues is present in α helix when compared to 18P. The loop regions between β3 and β4 strands of both models vary in number of residues present in it. Number of residues contributing β4 strand in both models vary. β6 strand is absent in both models. Major functional peptide region of alpha crystalline domains of both models varies. These differences observed in secondary structures support their distinct functional roles. It also emphasizes that a point mutation can cause structural variation.
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spelling pubmed-26461942009-03-02 Functional insights by comparison of modeled structures of 18kDa small heat shock protein and its mutant in Mycobacterium leprae Rehna, Elengikal Abdul Azeez Singh, Sanjeev Kumar Dharmalingam, Kuppamuthu Bioinformation Hypothesis In this work we are proposing Homology modeled structures of Mycobacterium leprae 18kDa heat shock protein and its mutant. The more closely related structure of the small heat shock protein (sHSP) belonging to the eukaryotic species from wheat sHSP16.9 and 16.3kDa ACR1 protein from Mycobacterium tuberculosis were used as template structures. Each model contains an N-terminal domain, alpha-crystalline domain and a C-terminal tail. The models showed that a single point mutation from serine to proline at 52(nd) position causes structural changes. The structural changes are observed in N-terminal region and alpha-crystalline domains. Serine in 52(nd) position is observed in β4 strand and Proline in 52(nd) position is observed in loop. The number of residues contributing α helix at N-terminal region varies in both models. In 18S more number of residues is present in α helix when compared to 18P. The loop regions between β3 and β4 strands of both models vary in number of residues present in it. Number of residues contributing β4 strand in both models vary. β6 strand is absent in both models. Major functional peptide region of alpha crystalline domains of both models varies. These differences observed in secondary structures support their distinct functional roles. It also emphasizes that a point mutation can cause structural variation. Biomedical Informatics Publishing Group 2008-12-31 /pmc/articles/PMC2646194/ /pubmed/19255639 Text en © 2008 Biomedical Informatics Publishing Group This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Hypothesis
Rehna, Elengikal Abdul Azeez
Singh, Sanjeev Kumar
Dharmalingam, Kuppamuthu
Functional insights by comparison of modeled structures of 18kDa small heat shock protein and its mutant in Mycobacterium leprae
title Functional insights by comparison of modeled structures of 18kDa small heat shock protein and its mutant in Mycobacterium leprae
title_full Functional insights by comparison of modeled structures of 18kDa small heat shock protein and its mutant in Mycobacterium leprae
title_fullStr Functional insights by comparison of modeled structures of 18kDa small heat shock protein and its mutant in Mycobacterium leprae
title_full_unstemmed Functional insights by comparison of modeled structures of 18kDa small heat shock protein and its mutant in Mycobacterium leprae
title_short Functional insights by comparison of modeled structures of 18kDa small heat shock protein and its mutant in Mycobacterium leprae
title_sort functional insights by comparison of modeled structures of 18kda small heat shock protein and its mutant in mycobacterium leprae
topic Hypothesis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2646194/
https://www.ncbi.nlm.nih.gov/pubmed/19255639
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