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Techniques for integrating ‐omics data

The challenge for -omics research is to tackle the problem of fragmentation of knowledge by integrating several sources of heterogeneous information into a coherent entity. It is widely recognized that successful data integration is one of the keys to improve productivity for stored data. Through pr...

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Detalles Bibliográficos
Autores principales: Akula, Siva Prasad, Miriyala, Raghava Naidu, Thota, Hanuman, Rao, Allam Appa, Gedela, Srinubabu
Formato: Texto
Lenguaje:English
Publicado: Biomedical Informatics Publishing Group 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2646865/
https://www.ncbi.nlm.nih.gov/pubmed/19255651
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author Akula, Siva Prasad
Miriyala, Raghava Naidu
Thota, Hanuman
Rao, Allam Appa
Gedela, Srinubabu
author_facet Akula, Siva Prasad
Miriyala, Raghava Naidu
Thota, Hanuman
Rao, Allam Appa
Gedela, Srinubabu
author_sort Akula, Siva Prasad
collection PubMed
description The challenge for -omics research is to tackle the problem of fragmentation of knowledge by integrating several sources of heterogeneous information into a coherent entity. It is widely recognized that successful data integration is one of the keys to improve productivity for stored data. Through proper data integration tools and algorithms, researchers may correlate relationships that enable them to make better and faster decisions. The need for data integration is essential for present ‐omics community, because ‐omics data is currently spread world wide in wide variety of formats. These formats can be integrated and migrated across platforms through different techniques and one of the important techniques often used is XML. XML is used to provide a document markup language that is easier to learn, retrieve, store and transmit. It is semantically richer than HTML. Here, we describe bio warehousing, database federation, controlled vocabularies and highlighting the XML application to store, migrate and validate -omics data.
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spelling pubmed-26468652009-03-02 Techniques for integrating ‐omics data Akula, Siva Prasad Miriyala, Raghava Naidu Thota, Hanuman Rao, Allam Appa Gedela, Srinubabu Bioinformation Views & Challenges The challenge for -omics research is to tackle the problem of fragmentation of knowledge by integrating several sources of heterogeneous information into a coherent entity. It is widely recognized that successful data integration is one of the keys to improve productivity for stored data. Through proper data integration tools and algorithms, researchers may correlate relationships that enable them to make better and faster decisions. The need for data integration is essential for present ‐omics community, because ‐omics data is currently spread world wide in wide variety of formats. These formats can be integrated and migrated across platforms through different techniques and one of the important techniques often used is XML. XML is used to provide a document markup language that is easier to learn, retrieve, store and transmit. It is semantically richer than HTML. Here, we describe bio warehousing, database federation, controlled vocabularies and highlighting the XML application to store, migrate and validate -omics data. Biomedical Informatics Publishing Group 2009-01-12 /pmc/articles/PMC2646865/ /pubmed/19255651 Text en © 2009 Biomedical Informatics Publishing Group This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Views & Challenges
Akula, Siva Prasad
Miriyala, Raghava Naidu
Thota, Hanuman
Rao, Allam Appa
Gedela, Srinubabu
Techniques for integrating ‐omics data
title Techniques for integrating ‐omics data
title_full Techniques for integrating ‐omics data
title_fullStr Techniques for integrating ‐omics data
title_full_unstemmed Techniques for integrating ‐omics data
title_short Techniques for integrating ‐omics data
title_sort techniques for integrating ‐omics data
topic Views & Challenges
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2646865/
https://www.ncbi.nlm.nih.gov/pubmed/19255651
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