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HLA Genes in Mayos Population from Northeast Mexico

HLA class I and class II alleles have been studied in 60 unrelated people belonging to Mayos ethnic group, which lives in the Mexican Pacific Sinaloa State. Mayos HLA profile was compared to other Amerindians and worldwide populations’ profile. A total of 14,896 chromosomes were used for comparisons...

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Autores principales: Arnaiz-Villena, A, Moscoso, J, Granados, J, Serrano-Vela, J.I, de la Peña, A., Reguera, R, Ferri, A, Seclen, E, Izaguirre, R, Perez-Hernandez, N, Vargas-Alarcon, G
Formato: Texto
Lenguaje:English
Publicado: Bentham Science Publishers Ltd. 2007
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2647159/
https://www.ncbi.nlm.nih.gov/pubmed/19412332
http://dx.doi.org/10.2174/138920207783591735
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author Arnaiz-Villena, A
Moscoso, J
Granados, J
Serrano-Vela, J.I
de la Peña, A.
Reguera, R
Ferri, A
Seclen, E
Izaguirre, R
Perez-Hernandez, N
Vargas-Alarcon, G
author_facet Arnaiz-Villena, A
Moscoso, J
Granados, J
Serrano-Vela, J.I
de la Peña, A.
Reguera, R
Ferri, A
Seclen, E
Izaguirre, R
Perez-Hernandez, N
Vargas-Alarcon, G
author_sort Arnaiz-Villena, A
collection PubMed
description HLA class I and class II alleles have been studied in 60 unrelated people belonging to Mayos ethnic group, which lives in the Mexican Pacific Sinaloa State. Mayos HLA profile was compared to other Amerindians and worldwide populations’ profile. A total of 14,896 chromosomes were used for comparisons. Genetic distances between populations, Neigbour-Joining dendrograms and correspondence analyses were performed to determine the genetic relationship among population. The new specific Mayo HLA haplotypes found are: HLA-A*02-B*35-DRB1*1406-DQB1*0301; HLA-A*02-B*48-DRB1*0404-DQB1*0302; HLA-A*24-B*51-DRB1*0407-DQB1*0302 and HLA-A*02-B*08-DRB1*0407-DQB1*0302. However, the typical Meso American HLADRB1*0407 represents a 40% of all DRB1 alleles. While common HLA characteristics are found in Amerindian distant ethnic groups, still new group specific HLA haplotypes are being found, suggesting that a common founder effect (i.e. high DRB1*0407) is noticed. Moreover, new HLA haplotypes are almost certainly appearing along time probably due to specific pathogen (?) selection for diversity. Mayo language is close to the Tarahumara one (another geographically close group); notwithstanding both groups are not genetically close according to our results, showing again the different evolution of genes and languages, which do not correlate. Finally, Sinaloa is one of the Mexican States in which more European genes are found. However, the results presented in this paper, where no European HLA genes are seen in Mayos, should have a bearing in establishing transplant programs and in HLA and disease studies.
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spelling pubmed-26471592009-04-30 HLA Genes in Mayos Population from Northeast Mexico Arnaiz-Villena, A Moscoso, J Granados, J Serrano-Vela, J.I de la Peña, A. Reguera, R Ferri, A Seclen, E Izaguirre, R Perez-Hernandez, N Vargas-Alarcon, G Curr Genomics Article HLA class I and class II alleles have been studied in 60 unrelated people belonging to Mayos ethnic group, which lives in the Mexican Pacific Sinaloa State. Mayos HLA profile was compared to other Amerindians and worldwide populations’ profile. A total of 14,896 chromosomes were used for comparisons. Genetic distances between populations, Neigbour-Joining dendrograms and correspondence analyses were performed to determine the genetic relationship among population. The new specific Mayo HLA haplotypes found are: HLA-A*02-B*35-DRB1*1406-DQB1*0301; HLA-A*02-B*48-DRB1*0404-DQB1*0302; HLA-A*24-B*51-DRB1*0407-DQB1*0302 and HLA-A*02-B*08-DRB1*0407-DQB1*0302. However, the typical Meso American HLADRB1*0407 represents a 40% of all DRB1 alleles. While common HLA characteristics are found in Amerindian distant ethnic groups, still new group specific HLA haplotypes are being found, suggesting that a common founder effect (i.e. high DRB1*0407) is noticed. Moreover, new HLA haplotypes are almost certainly appearing along time probably due to specific pathogen (?) selection for diversity. Mayo language is close to the Tarahumara one (another geographically close group); notwithstanding both groups are not genetically close according to our results, showing again the different evolution of genes and languages, which do not correlate. Finally, Sinaloa is one of the Mexican States in which more European genes are found. However, the results presented in this paper, where no European HLA genes are seen in Mayos, should have a bearing in establishing transplant programs and in HLA and disease studies. Bentham Science Publishers Ltd. 2007-11 /pmc/articles/PMC2647159/ /pubmed/19412332 http://dx.doi.org/10.2174/138920207783591735 Text en ©2007 Bentham Science Publishers Ltd. http://creativecommons.org/licenses/by/2.5/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.5/) which permits unrestrictive use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Article
Arnaiz-Villena, A
Moscoso, J
Granados, J
Serrano-Vela, J.I
de la Peña, A.
Reguera, R
Ferri, A
Seclen, E
Izaguirre, R
Perez-Hernandez, N
Vargas-Alarcon, G
HLA Genes in Mayos Population from Northeast Mexico
title HLA Genes in Mayos Population from Northeast Mexico
title_full HLA Genes in Mayos Population from Northeast Mexico
title_fullStr HLA Genes in Mayos Population from Northeast Mexico
title_full_unstemmed HLA Genes in Mayos Population from Northeast Mexico
title_short HLA Genes in Mayos Population from Northeast Mexico
title_sort hla genes in mayos population from northeast mexico
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2647159/
https://www.ncbi.nlm.nih.gov/pubmed/19412332
http://dx.doi.org/10.2174/138920207783591735
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