MatrixDB, a database focused on extracellular protein–protein and protein–carbohydrate interactions

Summary: MatrixDB (http://matrixdb.ibcp.fr) is a database reporting mammalian protein–protein and protein–carbohydrate interactions involving extracellular molecules. It takes into account the full interaction repertoire of the extracellular matrix involving full-length molecules, fragments and mult...

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Detalles Bibliográficos
Autores principales: Chautard, Emilie, Ballut, Lionel, Thierry-Mieg, Nicolas, Ricard-Blum, Sylvie
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2647840/
https://www.ncbi.nlm.nih.gov/pubmed/19147664
http://dx.doi.org/10.1093/bioinformatics/btp025
Descripción
Sumario:Summary: MatrixDB (http://matrixdb.ibcp.fr) is a database reporting mammalian protein–protein and protein–carbohydrate interactions involving extracellular molecules. It takes into account the full interaction repertoire of the extracellular matrix involving full-length molecules, fragments and multimers. The current version of MatrixDB contains 1972 interactions corresponding to 4412 experiments and involving 259 extracellular biomolecules. Availability: MatrixDB is freely available at http://matrixdb.ibcp.fr Contact: nicolas.thierry-mieg@imag.fr; s.ricard-blum@ibcp.fr Supplementary information: Supplementary data are available at Bioinformatics online.

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