MatrixDB, a database focused on extracellular protein–protein and protein–carbohydrate interactions

Summary: MatrixDB (http://matrixdb.ibcp.fr) is a database reporting mammalian protein–protein and protein–carbohydrate interactions involving extracellular molecules. It takes into account the full interaction repertoire of the extracellular matrix involving full-length molecules, fragments and mult...

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Detalles Bibliográficos
Autores principales: Chautard, Emilie, Ballut, Lionel, Thierry-Mieg, Nicolas, Ricard-Blum, Sylvie
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2647840/
https://www.ncbi.nlm.nih.gov/pubmed/19147664
http://dx.doi.org/10.1093/bioinformatics/btp025
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author Chautard, Emilie
Ballut, Lionel
Thierry-Mieg, Nicolas
Ricard-Blum, Sylvie
author_facet Chautard, Emilie
Ballut, Lionel
Thierry-Mieg, Nicolas
Ricard-Blum, Sylvie
author_sort Chautard, Emilie
collection PubMed
description Summary: MatrixDB (http://matrixdb.ibcp.fr) is a database reporting mammalian protein–protein and protein–carbohydrate interactions involving extracellular molecules. It takes into account the full interaction repertoire of the extracellular matrix involving full-length molecules, fragments and multimers. The current version of MatrixDB contains 1972 interactions corresponding to 4412 experiments and involving 259 extracellular biomolecules. Availability: MatrixDB is freely available at http://matrixdb.ibcp.fr Contact: nicolas.thierry-mieg@imag.fr; s.ricard-blum@ibcp.fr Supplementary information: Supplementary data are available at Bioinformatics online.
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spelling pubmed-26478402009-04-02 MatrixDB, a database focused on extracellular protein–protein and protein–carbohydrate interactions Chautard, Emilie Ballut, Lionel Thierry-Mieg, Nicolas Ricard-Blum, Sylvie Bioinformatics Applications Note Summary: MatrixDB (http://matrixdb.ibcp.fr) is a database reporting mammalian protein–protein and protein–carbohydrate interactions involving extracellular molecules. It takes into account the full interaction repertoire of the extracellular matrix involving full-length molecules, fragments and multimers. The current version of MatrixDB contains 1972 interactions corresponding to 4412 experiments and involving 259 extracellular biomolecules. Availability: MatrixDB is freely available at http://matrixdb.ibcp.fr Contact: nicolas.thierry-mieg@imag.fr; s.ricard-blum@ibcp.fr Supplementary information: Supplementary data are available at Bioinformatics online. Oxford University Press 2009-03-01 2009-01-15 /pmc/articles/PMC2647840/ /pubmed/19147664 http://dx.doi.org/10.1093/bioinformatics/btp025 Text en © 2009 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Applications Note
Chautard, Emilie
Ballut, Lionel
Thierry-Mieg, Nicolas
Ricard-Blum, Sylvie
MatrixDB, a database focused on extracellular protein–protein and protein–carbohydrate interactions
title MatrixDB, a database focused on extracellular protein–protein and protein–carbohydrate interactions
title_full MatrixDB, a database focused on extracellular protein–protein and protein–carbohydrate interactions
title_fullStr MatrixDB, a database focused on extracellular protein–protein and protein–carbohydrate interactions
title_full_unstemmed MatrixDB, a database focused on extracellular protein–protein and protein–carbohydrate interactions
title_short MatrixDB, a database focused on extracellular protein–protein and protein–carbohydrate interactions
title_sort matrixdb, a database focused on extracellular protein–protein and protein–carbohydrate interactions
topic Applications Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2647840/
https://www.ncbi.nlm.nih.gov/pubmed/19147664
http://dx.doi.org/10.1093/bioinformatics/btp025
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AT ricardblumsylvie matrixdbadatabasefocusedonextracellularproteinproteinandproteincarbohydrateinteractions

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