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Diurnal variation of the human adipose transcriptome and the link to metabolic disease

BACKGROUND: Circadian (diurnal) rhythm is an integral part of the physiology of the body; specifically, sleep, feeding behavior and metabolism are tightly linked to the light-dark cycle dictated by earth's rotation. METHODS: The present study examines the effect of diurnal rhythm on gene expres...

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Autores principales: Loboda, Andrey, Kraft, Walter K, Fine, Bernard, Joseph, Jeffrey, Nebozhyn, Michael, Zhang, Chunsheng, He, Yudong, Yang, Xia, Wright, Christopher, Morris, Mark, Chalikonda, Ira, Ferguson, Mark, Emilsson, Valur, Leonardson, Amy, Lamb, John, Dai, Hongyue, Schadt, Eric, Greenberg, Howard E, Lum, Pek Yee
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2647943/
https://www.ncbi.nlm.nih.gov/pubmed/19203388
http://dx.doi.org/10.1186/1755-8794-2-7
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author Loboda, Andrey
Kraft, Walter K
Fine, Bernard
Joseph, Jeffrey
Nebozhyn, Michael
Zhang, Chunsheng
He, Yudong
Yang, Xia
Wright, Christopher
Morris, Mark
Chalikonda, Ira
Ferguson, Mark
Emilsson, Valur
Leonardson, Amy
Lamb, John
Dai, Hongyue
Schadt, Eric
Greenberg, Howard E
Lum, Pek Yee
author_facet Loboda, Andrey
Kraft, Walter K
Fine, Bernard
Joseph, Jeffrey
Nebozhyn, Michael
Zhang, Chunsheng
He, Yudong
Yang, Xia
Wright, Christopher
Morris, Mark
Chalikonda, Ira
Ferguson, Mark
Emilsson, Valur
Leonardson, Amy
Lamb, John
Dai, Hongyue
Schadt, Eric
Greenberg, Howard E
Lum, Pek Yee
author_sort Loboda, Andrey
collection PubMed
description BACKGROUND: Circadian (diurnal) rhythm is an integral part of the physiology of the body; specifically, sleep, feeding behavior and metabolism are tightly linked to the light-dark cycle dictated by earth's rotation. METHODS: The present study examines the effect of diurnal rhythm on gene expression in the subcutaneous adipose tissue of overweight to mildly obese, healthy individuals. In this well-controlled clinical study, adipose biopsies were taken in the morning, afternoon and evening from individuals in three study arms: treatment with the weight loss drug sibutramine/fasted, placebo/fed and placebo/fasted. RESULTS: The results indicated that diurnal rhythm was the most significant driver of gene expression variation in the human adipose tissue, with at least 25% of the genes having had significant changes in their expression levels during the course of the day. The mRNA expression levels of core clock genes at a specific time of day were consistent across multiple subjects on different days in all three arms, indicating robust diurnal regulation irrespective of potential confounding factors. The genes essential for energy metabolism and tissue physiology were part of the diurnal signature. We hypothesize that the diurnal transition of the expression of energy metabolism genes reflects the shift in the adipose tissue from an energy-expending state in the morning to an energy-storing state in the evening. Consistent with this hypothesis, the diurnal transition was delayed by fasting and treatment with sibutramine. Finally, an in silico comparison of the diurnal signature with data from the publicly-available Connectivity Map demonstrated a significant association with transcripts that were repressed by mTOR inhibitors, suggesting a possible link between mTOR signaling, diurnal gene expression and metabolic regulation. CONCLUSION: Diurnal rhythm plays an important role in the physiology and regulation of energy metabolism in the adipose tissue and should be considered in the selection of novel targets for the treatment of obesity and other metabolic disorders.
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spelling pubmed-26479432009-02-26 Diurnal variation of the human adipose transcriptome and the link to metabolic disease Loboda, Andrey Kraft, Walter K Fine, Bernard Joseph, Jeffrey Nebozhyn, Michael Zhang, Chunsheng He, Yudong Yang, Xia Wright, Christopher Morris, Mark Chalikonda, Ira Ferguson, Mark Emilsson, Valur Leonardson, Amy Lamb, John Dai, Hongyue Schadt, Eric Greenberg, Howard E Lum, Pek Yee BMC Med Genomics Research Article BACKGROUND: Circadian (diurnal) rhythm is an integral part of the physiology of the body; specifically, sleep, feeding behavior and metabolism are tightly linked to the light-dark cycle dictated by earth's rotation. METHODS: The present study examines the effect of diurnal rhythm on gene expression in the subcutaneous adipose tissue of overweight to mildly obese, healthy individuals. In this well-controlled clinical study, adipose biopsies were taken in the morning, afternoon and evening from individuals in three study arms: treatment with the weight loss drug sibutramine/fasted, placebo/fed and placebo/fasted. RESULTS: The results indicated that diurnal rhythm was the most significant driver of gene expression variation in the human adipose tissue, with at least 25% of the genes having had significant changes in their expression levels during the course of the day. The mRNA expression levels of core clock genes at a specific time of day were consistent across multiple subjects on different days in all three arms, indicating robust diurnal regulation irrespective of potential confounding factors. The genes essential for energy metabolism and tissue physiology were part of the diurnal signature. We hypothesize that the diurnal transition of the expression of energy metabolism genes reflects the shift in the adipose tissue from an energy-expending state in the morning to an energy-storing state in the evening. Consistent with this hypothesis, the diurnal transition was delayed by fasting and treatment with sibutramine. Finally, an in silico comparison of the diurnal signature with data from the publicly-available Connectivity Map demonstrated a significant association with transcripts that were repressed by mTOR inhibitors, suggesting a possible link between mTOR signaling, diurnal gene expression and metabolic regulation. CONCLUSION: Diurnal rhythm plays an important role in the physiology and regulation of energy metabolism in the adipose tissue and should be considered in the selection of novel targets for the treatment of obesity and other metabolic disorders. BioMed Central 2009-02-09 /pmc/articles/PMC2647943/ /pubmed/19203388 http://dx.doi.org/10.1186/1755-8794-2-7 Text en Copyright © 2009 Loboda et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Loboda, Andrey
Kraft, Walter K
Fine, Bernard
Joseph, Jeffrey
Nebozhyn, Michael
Zhang, Chunsheng
He, Yudong
Yang, Xia
Wright, Christopher
Morris, Mark
Chalikonda, Ira
Ferguson, Mark
Emilsson, Valur
Leonardson, Amy
Lamb, John
Dai, Hongyue
Schadt, Eric
Greenberg, Howard E
Lum, Pek Yee
Diurnal variation of the human adipose transcriptome and the link to metabolic disease
title Diurnal variation of the human adipose transcriptome and the link to metabolic disease
title_full Diurnal variation of the human adipose transcriptome and the link to metabolic disease
title_fullStr Diurnal variation of the human adipose transcriptome and the link to metabolic disease
title_full_unstemmed Diurnal variation of the human adipose transcriptome and the link to metabolic disease
title_short Diurnal variation of the human adipose transcriptome and the link to metabolic disease
title_sort diurnal variation of the human adipose transcriptome and the link to metabolic disease
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2647943/
https://www.ncbi.nlm.nih.gov/pubmed/19203388
http://dx.doi.org/10.1186/1755-8794-2-7
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