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Passport, a native Tc1 transposon from flatfish, is functionally active in vertebrate cells

The Tc1/mariner family of DNA transposons is widespread across fungal, plant and animal kingdoms, and thought to contribute to the evolution of their host genomes. To date, an active Tc1 transposon has not been identified within the native genome of a vertebrate. We demonstrate that Passport, a nati...

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Detalles Bibliográficos
Autores principales: Clark, Karl J., Carlson, Daniel F., Leaver, Michael J., Foster, Linda K., Fahrenkrug, Scott C.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2651795/
https://www.ncbi.nlm.nih.gov/pubmed/19136468
http://dx.doi.org/10.1093/nar/gkn1025
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author Clark, Karl J.
Carlson, Daniel F.
Leaver, Michael J.
Foster, Linda K.
Fahrenkrug, Scott C.
author_facet Clark, Karl J.
Carlson, Daniel F.
Leaver, Michael J.
Foster, Linda K.
Fahrenkrug, Scott C.
author_sort Clark, Karl J.
collection PubMed
description The Tc1/mariner family of DNA transposons is widespread across fungal, plant and animal kingdoms, and thought to contribute to the evolution of their host genomes. To date, an active Tc1 transposon has not been identified within the native genome of a vertebrate. We demonstrate that Passport, a native transposon isolated from a fish (Pleuronectes platessa), is active in a variety of vertebrate cells. In transposition assays, we found that the Passport transposon system improved stable cellular transgenesis by 40-fold, has an apparent preference for insertion into genes, and is subject to overproduction inhibition like other Tc1 elements. Passport represents the first vertebrate Tc1 element described as both natively intact and functionally active, and given its restricted phylogenetic distribution, may be contemporaneously active. The Passport transposon system thus complements the available genetic tools for the manipulation of vertebrate genomes, and may provide a unique system for studying the infiltration of vertebrate genomes by Tc1 elements.
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spelling pubmed-26517952009-03-13 Passport, a native Tc1 transposon from flatfish, is functionally active in vertebrate cells Clark, Karl J. Carlson, Daniel F. Leaver, Michael J. Foster, Linda K. Fahrenkrug, Scott C. Nucleic Acids Res Genomics The Tc1/mariner family of DNA transposons is widespread across fungal, plant and animal kingdoms, and thought to contribute to the evolution of their host genomes. To date, an active Tc1 transposon has not been identified within the native genome of a vertebrate. We demonstrate that Passport, a native transposon isolated from a fish (Pleuronectes platessa), is active in a variety of vertebrate cells. In transposition assays, we found that the Passport transposon system improved stable cellular transgenesis by 40-fold, has an apparent preference for insertion into genes, and is subject to overproduction inhibition like other Tc1 elements. Passport represents the first vertebrate Tc1 element described as both natively intact and functionally active, and given its restricted phylogenetic distribution, may be contemporaneously active. The Passport transposon system thus complements the available genetic tools for the manipulation of vertebrate genomes, and may provide a unique system for studying the infiltration of vertebrate genomes by Tc1 elements. Oxford University Press 2009-03 2009-01-09 /pmc/articles/PMC2651795/ /pubmed/19136468 http://dx.doi.org/10.1093/nar/gkn1025 Text en © 2009 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Genomics
Clark, Karl J.
Carlson, Daniel F.
Leaver, Michael J.
Foster, Linda K.
Fahrenkrug, Scott C.
Passport, a native Tc1 transposon from flatfish, is functionally active in vertebrate cells
title Passport, a native Tc1 transposon from flatfish, is functionally active in vertebrate cells
title_full Passport, a native Tc1 transposon from flatfish, is functionally active in vertebrate cells
title_fullStr Passport, a native Tc1 transposon from flatfish, is functionally active in vertebrate cells
title_full_unstemmed Passport, a native Tc1 transposon from flatfish, is functionally active in vertebrate cells
title_short Passport, a native Tc1 transposon from flatfish, is functionally active in vertebrate cells
title_sort passport, a native tc1 transposon from flatfish, is functionally active in vertebrate cells
topic Genomics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2651795/
https://www.ncbi.nlm.nih.gov/pubmed/19136468
http://dx.doi.org/10.1093/nar/gkn1025
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